Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27293 | 82102;82103;82104 | chr2:178564255;178564254;178564253 | chr2:179428982;179428981;179428980 |
N2AB | 25652 | 77179;77180;77181 | chr2:178564255;178564254;178564253 | chr2:179428982;179428981;179428980 |
N2A | 24725 | 74398;74399;74400 | chr2:178564255;178564254;178564253 | chr2:179428982;179428981;179428980 |
N2B | 18228 | 54907;54908;54909 | chr2:178564255;178564254;178564253 | chr2:179428982;179428981;179428980 |
Novex-1 | 18353 | 55282;55283;55284 | chr2:178564255;178564254;178564253 | chr2:179428982;179428981;179428980 |
Novex-2 | 18420 | 55483;55484;55485 | chr2:178564255;178564254;178564253 | chr2:179428982;179428981;179428980 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.567 | 0.42 | 0.395143324098 | gnomAD-4.0.0 | 6.84439E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
F/S | rs751553517 | -2.276 | 1.0 | N | 0.751 | 0.557 | 0.680157959374 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
F/S | rs751553517 | -2.276 | 1.0 | N | 0.751 | 0.557 | 0.680157959374 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8611 | likely_pathogenic | 0.864 | pathogenic | -2.742 | Highly Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
F/C | 0.5888 | likely_pathogenic | 0.574 | pathogenic | -2.15 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.455843472 | None | None | I |
F/D | 0.9975 | likely_pathogenic | 0.9981 | pathogenic | -3.198 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
F/E | 0.9967 | likely_pathogenic | 0.9972 | pathogenic | -2.99 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
F/G | 0.9813 | likely_pathogenic | 0.9823 | pathogenic | -3.188 | Highly Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
F/H | 0.9755 | likely_pathogenic | 0.9802 | pathogenic | -1.735 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
F/I | 0.2649 | likely_benign | 0.2837 | benign | -1.296 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | N | 0.416879295 | None | None | I |
F/K | 0.9961 | likely_pathogenic | 0.9969 | pathogenic | -2.558 | Highly Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
F/L | 0.7883 | likely_pathogenic | 0.8044 | pathogenic | -1.296 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.40337128 | None | None | I |
F/M | 0.5686 | likely_pathogenic | 0.5977 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
F/N | 0.9913 | likely_pathogenic | 0.9925 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
F/P | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
F/Q | 0.9932 | likely_pathogenic | 0.9941 | pathogenic | -2.996 | Highly Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
F/R | 0.9879 | likely_pathogenic | 0.9898 | pathogenic | -2.078 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
F/S | 0.9485 | likely_pathogenic | 0.9494 | pathogenic | -3.726 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.466946288 | None | None | I |
F/T | 0.9043 | likely_pathogenic | 0.9134 | pathogenic | -3.395 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
F/V | 0.2565 | likely_benign | 0.2776 | benign | -1.788 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.429400301 | None | None | I |
F/W | 0.8458 | likely_pathogenic | 0.8579 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
F/Y | 0.5704 | likely_pathogenic | 0.5971 | pathogenic | -0.875 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.455589982 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.