Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27295 | 82108;82109;82110 | chr2:178564249;178564248;178564247 | chr2:179428976;179428975;179428974 |
N2AB | 25654 | 77185;77186;77187 | chr2:178564249;178564248;178564247 | chr2:179428976;179428975;179428974 |
N2A | 24727 | 74404;74405;74406 | chr2:178564249;178564248;178564247 | chr2:179428976;179428975;179428974 |
N2B | 18230 | 54913;54914;54915 | chr2:178564249;178564248;178564247 | chr2:179428976;179428975;179428974 |
Novex-1 | 18355 | 55288;55289;55290 | chr2:178564249;178564248;178564247 | chr2:179428976;179428975;179428974 |
Novex-2 | 18422 | 55489;55490;55491 | chr2:178564249;178564248;178564247 | chr2:179428976;179428975;179428974 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.9 | D | 0.474 | 0.484 | 0.660250038783 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.836 | likely_pathogenic | 0.8458 | pathogenic | -1.394 | Destabilizing | 0.983 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/C | 0.8637 | likely_pathogenic | 0.8655 | pathogenic | -1.166 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/D | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -2.351 | Highly Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
L/E | 0.993 | likely_pathogenic | 0.9941 | pathogenic | -2.111 | Highly Destabilizing | 0.999 | D | 0.866 | deleterious | None | None | None | None | N |
L/F | 0.4204 | ambiguous | 0.3921 | ambiguous | -1.03 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | D | 0.535502417 | None | None | N |
L/G | 0.9843 | likely_pathogenic | 0.986 | pathogenic | -1.811 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
L/H | 0.983 | likely_pathogenic | 0.985 | pathogenic | -2.074 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.623113421 | None | None | N |
L/I | 0.1052 | likely_benign | 0.1063 | benign | -0.147 | Destabilizing | 0.198 | N | 0.279 | neutral | N | 0.503820307 | None | None | N |
L/K | 0.9897 | likely_pathogenic | 0.9916 | pathogenic | -1.327 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
L/M | 0.1885 | likely_benign | 0.1865 | benign | -0.549 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
L/N | 0.9951 | likely_pathogenic | 0.9962 | pathogenic | -1.98 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
L/P | 0.9896 | likely_pathogenic | 0.9896 | pathogenic | -0.555 | Destabilizing | 0.999 | D | 0.863 | deleterious | D | 0.623113421 | None | None | N |
L/Q | 0.9757 | likely_pathogenic | 0.9785 | pathogenic | -1.562 | Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
L/R | 0.9793 | likely_pathogenic | 0.9814 | pathogenic | -1.793 | Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.623113421 | None | None | N |
L/S | 0.9806 | likely_pathogenic | 0.9828 | pathogenic | -2.23 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
L/T | 0.9073 | likely_pathogenic | 0.9224 | pathogenic | -1.854 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
L/V | 0.1474 | likely_benign | 0.1532 | benign | -0.555 | Destabilizing | 0.9 | D | 0.474 | neutral | D | 0.566617048 | None | None | N |
L/W | 0.9113 | likely_pathogenic | 0.9035 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
L/Y | 0.9439 | likely_pathogenic | 0.9459 | pathogenic | -1.146 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.