Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2729882117;82118;82119 chr2:178564240;178564239;178564238chr2:179428967;179428966;179428965
N2AB2565777194;77195;77196 chr2:178564240;178564239;178564238chr2:179428967;179428966;179428965
N2A2473074413;74414;74415 chr2:178564240;178564239;178564238chr2:179428967;179428966;179428965
N2B1823354922;54923;54924 chr2:178564240;178564239;178564238chr2:179428967;179428966;179428965
Novex-11835855297;55298;55299 chr2:178564240;178564239;178564238chr2:179428967;179428966;179428965
Novex-21842555498;55499;55500 chr2:178564240;178564239;178564238chr2:179428967;179428966;179428965
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: D
  • RefSeq wild type transcript codon: GAC
  • RefSeq wild type template codon: CTG
  • Domain: Ig-140
  • Domain position: 21
  • Structural Position: 34
  • Q(SASA): 0.4762
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
D/A rs557375464 -0.445 1.0 N 0.753 0.479 0.52991035303 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 3.27E-05 None 0 0 0
D/A rs557375464 -0.445 1.0 N 0.753 0.479 0.52991035303 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 0 2.06782E-04 0
D/A rs557375464 -0.445 1.0 N 0.753 0.479 0.52991035303 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 0 None None None 1E-03 None
D/A rs557375464 -0.445 1.0 N 0.753 0.479 0.52991035303 gnomAD-4.0.0 6.56737E-06 None None None None I None 0 0 None 0 0 None 0 0 0 2.06954E-04 0
D/G None None 1.0 D 0.762 0.518 0.473378105536 gnomAD-4.0.0 1.59237E-06 None None None None I None 0 0 None 0 0 None 0 0 0 1.43271E-05 0
D/N rs200697681 -0.832 1.0 D 0.673 0.411 None gnomAD-2.1.1 2.79264E-04 None None None None I None 8.27E-05 1.18792E-03 None 0 0 None 0 None 0 2.43084E-04 4.21585E-04
D/N rs200697681 -0.832 1.0 D 0.673 0.411 None gnomAD-3.1.2 1.64344E-04 None None None None I None 9.65E-05 3.93339E-04 0 5.77367E-04 0 None 0 0 1.76419E-04 2.07125E-04 0
D/N rs200697681 -0.832 1.0 D 0.673 0.411 None 1000 genomes 1.99681E-04 None None None None I None 0 1.4E-03 None None 0 0 None None None 0 None
D/N rs200697681 -0.832 1.0 D 0.673 0.411 None gnomAD-4.0.0 1.59925E-04 None None None None I None 7.99659E-05 8.66753E-04 None 6.75813E-05 2.22916E-05 None 0 0 1.57657E-04 1.09796E-05 1.60056E-04

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
D/A 0.215 likely_benign 0.2541 benign -0.294 Destabilizing 1.0 D 0.753 deleterious N 0.488324545 None None I
D/C 0.692 likely_pathogenic 0.7416 pathogenic -0.14 Destabilizing 1.0 D 0.76 deleterious None None None None I
D/E 0.276 likely_benign 0.308 benign -0.381 Destabilizing 1.0 D 0.453 neutral N 0.499040184 None None I
D/F 0.6298 likely_pathogenic 0.6587 pathogenic -0.126 Destabilizing 1.0 D 0.781 deleterious None None None None I
D/G 0.2583 likely_benign 0.297 benign -0.525 Destabilizing 1.0 D 0.762 deleterious D 0.529672522 None None I
D/H 0.3646 ambiguous 0.4093 ambiguous -0.041 Destabilizing 1.0 D 0.749 deleterious N 0.51666594 None None I
D/I 0.4168 ambiguous 0.4552 ambiguous 0.273 Stabilizing 1.0 D 0.787 deleterious None None None None I
D/K 0.5564 ambiguous 0.6149 pathogenic 0.03 Stabilizing 1.0 D 0.787 deleterious None None None None I
D/L 0.4763 ambiguous 0.5265 ambiguous 0.273 Stabilizing 1.0 D 0.791 deleterious None None None None I
D/M 0.6558 likely_pathogenic 0.6914 pathogenic 0.341 Stabilizing 1.0 D 0.762 deleterious None None None None I
D/N 0.1183 likely_benign 0.1268 benign -0.237 Destabilizing 1.0 D 0.673 neutral D 0.528632372 None None I
D/P 0.912 likely_pathogenic 0.9272 pathogenic 0.107 Stabilizing 1.0 D 0.784 deleterious None None None None I
D/Q 0.4902 ambiguous 0.5477 ambiguous -0.189 Destabilizing 1.0 D 0.703 prob.neutral None None None None I
D/R 0.566 likely_pathogenic 0.6174 pathogenic 0.271 Stabilizing 1.0 D 0.779 deleterious None None None None I
D/S 0.1774 likely_benign 0.1889 benign -0.383 Destabilizing 1.0 D 0.683 prob.neutral None None None None I
D/T 0.3253 likely_benign 0.3631 ambiguous -0.209 Destabilizing 1.0 D 0.794 deleterious None None None None I
D/V 0.2551 likely_benign 0.2878 benign 0.107 Stabilizing 1.0 D 0.787 deleterious N 0.497618819 None None I
D/W 0.9067 likely_pathogenic 0.917 pathogenic 0.011 Stabilizing 1.0 D 0.751 deleterious None None None None I
D/Y 0.2703 likely_benign 0.3026 benign 0.101 Stabilizing 1.0 D 0.769 deleterious N 0.498899194 None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.