Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2730 | 8413;8414;8415 | chr2:178770604;178770603;178770602 | chr2:179635331;179635330;179635329 |
N2AB | 2730 | 8413;8414;8415 | chr2:178770604;178770603;178770602 | chr2:179635331;179635330;179635329 |
N2A | 2730 | 8413;8414;8415 | chr2:178770604;178770603;178770602 | chr2:179635331;179635330;179635329 |
N2B | 2684 | 8275;8276;8277 | chr2:178770604;178770603;178770602 | chr2:179635331;179635330;179635329 |
Novex-1 | 2684 | 8275;8276;8277 | chr2:178770604;178770603;178770602 | chr2:179635331;179635330;179635329 |
Novex-2 | 2684 | 8275;8276;8277 | chr2:178770604;178770603;178770602 | chr2:179635331;179635330;179635329 |
Novex-3 | 2730 | 8413;8414;8415 | chr2:178770604;178770603;178770602 | chr2:179635331;179635330;179635329 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.851 | 0.816 | 0.8892766192 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8834 | likely_pathogenic | 0.9216 | pathogenic | -3.282 | Highly Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/C | 0.9044 | likely_pathogenic | 0.9421 | pathogenic | -2.712 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/D | 0.9977 | likely_pathogenic | 0.9989 | pathogenic | -3.976 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/E | 0.9907 | likely_pathogenic | 0.9952 | pathogenic | -3.673 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/F | 0.6744 | likely_pathogenic | 0.8037 | pathogenic | -1.832 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.630499019 | None | None | N |
L/G | 0.9733 | likely_pathogenic | 0.9842 | pathogenic | -3.867 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/H | 0.9834 | likely_pathogenic | 0.9925 | pathogenic | -3.331 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.672805842 | None | None | N |
L/I | 0.2162 | likely_benign | 0.2832 | benign | -1.513 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.491240675 | None | None | N |
L/K | 0.988 | likely_pathogenic | 0.9937 | pathogenic | -2.678 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/M | 0.2854 | likely_benign | 0.351 | ambiguous | -1.771 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/N | 0.9865 | likely_pathogenic | 0.9933 | pathogenic | -3.334 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/P | 0.9904 | likely_pathogenic | 0.9956 | pathogenic | -2.096 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.672805842 | None | None | N |
L/Q | 0.973 | likely_pathogenic | 0.9869 | pathogenic | -3.028 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/R | 0.9781 | likely_pathogenic | 0.988 | pathogenic | -2.486 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.672805842 | None | None | N |
L/S | 0.9788 | likely_pathogenic | 0.9899 | pathogenic | -3.919 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/T | 0.8894 | likely_pathogenic | 0.9313 | pathogenic | -3.469 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/V | 0.2273 | likely_benign | 0.2786 | benign | -2.096 | Highly Destabilizing | 0.999 | D | 0.558 | neutral | N | 0.480989714 | None | None | N |
L/W | 0.9648 | likely_pathogenic | 0.9847 | pathogenic | -2.265 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/Y | 0.9654 | likely_pathogenic | 0.9846 | pathogenic | -2.162 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.