Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2731 | 8416;8417;8418 | chr2:178770601;178770600;178770599 | chr2:179635328;179635327;179635326 |
N2AB | 2731 | 8416;8417;8418 | chr2:178770601;178770600;178770599 | chr2:179635328;179635327;179635326 |
N2A | 2731 | 8416;8417;8418 | chr2:178770601;178770600;178770599 | chr2:179635328;179635327;179635326 |
N2B | 2685 | 8278;8279;8280 | chr2:178770601;178770600;178770599 | chr2:179635328;179635327;179635326 |
Novex-1 | 2685 | 8278;8279;8280 | chr2:178770601;178770600;178770599 | chr2:179635328;179635327;179635326 |
Novex-2 | 2685 | 8278;8279;8280 | chr2:178770601;178770600;178770599 | chr2:179635328;179635327;179635326 |
Novex-3 | 2731 | 8416;8417;8418 | chr2:178770601;178770600;178770599 | chr2:179635328;179635327;179635326 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2091318582 | None | 0.76 | D | 0.371 | 0.323 | 0.320256813643 | gnomAD-4.0.0 | 1.59055E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85649E-06 | 0 | 0 |
T/I | None | None | 0.991 | D | 0.591 | 0.675 | 0.646977041325 | gnomAD-4.0.0 | 1.59057E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85649E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3108 | likely_benign | 0.4494 | ambiguous | -0.704 | Destabilizing | 0.76 | D | 0.371 | neutral | D | 0.559990502 | None | None | N |
T/C | 0.8972 | likely_pathogenic | 0.9565 | pathogenic | -0.354 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
T/D | 0.7008 | likely_pathogenic | 0.841 | pathogenic | -0.373 | Destabilizing | 0.986 | D | 0.517 | neutral | None | None | None | None | N |
T/E | 0.7747 | likely_pathogenic | 0.9 | pathogenic | -0.355 | Destabilizing | 0.986 | D | 0.526 | neutral | None | None | None | None | N |
T/F | 0.8152 | likely_pathogenic | 0.9199 | pathogenic | -0.61 | Destabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
T/G | 0.6511 | likely_pathogenic | 0.7712 | pathogenic | -0.994 | Destabilizing | 0.91 | D | 0.475 | neutral | None | None | None | None | N |
T/H | 0.7337 | likely_pathogenic | 0.8726 | pathogenic | -1.257 | Destabilizing | 0.999 | D | 0.602 | neutral | None | None | None | None | N |
T/I | 0.7433 | likely_pathogenic | 0.8785 | pathogenic | -0.015 | Destabilizing | 0.991 | D | 0.591 | neutral | D | 0.561514846 | None | None | N |
T/K | 0.817 | likely_pathogenic | 0.9291 | pathogenic | -0.881 | Destabilizing | 0.982 | D | 0.523 | neutral | D | 0.558310477 | None | None | N |
T/L | 0.4185 | ambiguous | 0.602 | pathogenic | -0.015 | Destabilizing | 0.953 | D | 0.475 | neutral | None | None | None | None | N |
T/M | 0.3067 | likely_benign | 0.4691 | ambiguous | 0.194 | Stabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
T/N | 0.2932 | likely_benign | 0.4224 | ambiguous | -0.788 | Destabilizing | 0.986 | D | 0.483 | neutral | None | None | None | None | N |
T/P | 0.5924 | likely_pathogenic | 0.7765 | pathogenic | -0.212 | Destabilizing | 0.991 | D | 0.588 | neutral | D | 0.564338338 | None | None | N |
T/Q | 0.6855 | likely_pathogenic | 0.8434 | pathogenic | -0.868 | Destabilizing | 0.993 | D | 0.584 | neutral | None | None | None | None | N |
T/R | 0.7422 | likely_pathogenic | 0.8918 | pathogenic | -0.681 | Destabilizing | 0.982 | D | 0.587 | neutral | D | 0.602766267 | None | None | N |
T/S | 0.1675 | likely_benign | 0.206 | benign | -1.01 | Destabilizing | 0.17 | N | 0.172 | neutral | N | 0.450720272 | None | None | N |
T/V | 0.6315 | likely_pathogenic | 0.7749 | pathogenic | -0.212 | Destabilizing | 0.953 | D | 0.408 | neutral | None | None | None | None | N |
T/W | 0.9481 | likely_pathogenic | 0.9781 | pathogenic | -0.623 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
T/Y | 0.8249 | likely_pathogenic | 0.9251 | pathogenic | -0.405 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.