Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27310 | 82153;82154;82155 | chr2:178564204;178564203;178564202 | chr2:179428931;179428930;179428929 |
N2AB | 25669 | 77230;77231;77232 | chr2:178564204;178564203;178564202 | chr2:179428931;179428930;179428929 |
N2A | 24742 | 74449;74450;74451 | chr2:178564204;178564203;178564202 | chr2:179428931;179428930;179428929 |
N2B | 18245 | 54958;54959;54960 | chr2:178564204;178564203;178564202 | chr2:179428931;179428930;179428929 |
Novex-1 | 18370 | 55333;55334;55335 | chr2:178564204;178564203;178564202 | chr2:179428931;179428930;179428929 |
Novex-2 | 18437 | 55534;55535;55536 | chr2:178564204;178564203;178564202 | chr2:179428931;179428930;179428929 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs794727454 | None | 0.001 | N | 0.269 | 0.145 | 0.0884992946249 | gnomAD-4.0.0 | 1.36856E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79894E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.081 | likely_benign | 0.0795 | benign | -0.817 | Destabilizing | None | N | 0.221 | neutral | N | 0.469060341 | None | None | N |
S/C | 0.0751 | likely_benign | 0.0761 | benign | -0.409 | Destabilizing | 0.667 | D | 0.503 | neutral | None | None | None | None | N |
S/D | 0.4399 | ambiguous | 0.4022 | ambiguous | -0.61 | Destabilizing | 0.22 | N | 0.454 | neutral | None | None | None | None | N |
S/E | 0.3762 | ambiguous | 0.3294 | benign | -0.448 | Destabilizing | 0.22 | N | 0.453 | neutral | None | None | None | None | N |
S/F | 0.1055 | likely_benign | 0.0975 | benign | -0.748 | Destabilizing | 0.001 | N | 0.454 | neutral | None | None | None | None | N |
S/G | 0.1264 | likely_benign | 0.121 | benign | -1.198 | Destabilizing | 0.055 | N | 0.409 | neutral | None | None | None | None | N |
S/H | 0.2352 | likely_benign | 0.228 | benign | -1.491 | Destabilizing | 0.859 | D | 0.507 | neutral | None | None | None | None | N |
S/I | 0.1203 | likely_benign | 0.1052 | benign | 0.141 | Stabilizing | 0.001 | N | 0.369 | neutral | None | None | None | None | N |
S/K | 0.5422 | ambiguous | 0.489 | ambiguous | 0.036 | Stabilizing | 0.22 | N | 0.451 | neutral | None | None | None | None | N |
S/L | 0.0554 | likely_benign | 0.0529 | benign | 0.141 | Stabilizing | None | N | 0.33 | neutral | N | 0.367335909 | None | None | N |
S/M | 0.1131 | likely_benign | 0.102 | benign | 0.108 | Stabilizing | 0.497 | N | 0.524 | neutral | None | None | None | None | N |
S/N | 0.1442 | likely_benign | 0.1337 | benign | -0.485 | Destabilizing | 0.364 | N | 0.477 | neutral | None | None | None | None | N |
S/P | 0.9515 | likely_pathogenic | 0.9465 | pathogenic | -0.144 | Destabilizing | 0.001 | N | 0.269 | neutral | N | 0.466706025 | None | None | N |
S/Q | 0.3517 | ambiguous | 0.3228 | benign | -0.325 | Destabilizing | 0.667 | D | 0.503 | neutral | None | None | None | None | N |
S/R | 0.4666 | ambiguous | 0.4301 | ambiguous | -0.309 | Destabilizing | 0.667 | D | 0.541 | neutral | None | None | None | None | N |
S/T | 0.0779 | likely_benign | 0.072 | benign | -0.311 | Destabilizing | 0.081 | N | 0.432 | neutral | N | 0.430040593 | None | None | N |
S/V | 0.1277 | likely_benign | 0.1131 | benign | -0.144 | Destabilizing | 0.02 | N | 0.481 | neutral | None | None | None | None | N |
S/W | 0.169 | likely_benign | 0.1701 | benign | -0.858 | Destabilizing | 0.958 | D | 0.587 | neutral | None | None | None | None | N |
S/Y | 0.0979 | likely_benign | 0.1004 | benign | -0.442 | Destabilizing | 0.331 | N | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.