Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27315 | 82168;82169;82170 | chr2:178564189;178564188;178564187 | chr2:179428916;179428915;179428914 |
N2AB | 25674 | 77245;77246;77247 | chr2:178564189;178564188;178564187 | chr2:179428916;179428915;179428914 |
N2A | 24747 | 74464;74465;74466 | chr2:178564189;178564188;178564187 | chr2:179428916;179428915;179428914 |
N2B | 18250 | 54973;54974;54975 | chr2:178564189;178564188;178564187 | chr2:179428916;179428915;179428914 |
Novex-1 | 18375 | 55348;55349;55350 | chr2:178564189;178564188;178564187 | chr2:179428916;179428915;179428914 |
Novex-2 | 18442 | 55549;55550;55551 | chr2:178564189;178564188;178564187 | chr2:179428916;179428915;179428914 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.942 | N | 0.697 | 0.351 | 0.505946769237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1003 | likely_benign | 0.099 | benign | -0.418 | Destabilizing | 0.822 | D | 0.662 | neutral | N | 0.492404734 | None | None | N |
E/C | 0.5895 | likely_pathogenic | 0.604 | pathogenic | -0.073 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
E/D | 0.0845 | likely_benign | 0.0835 | benign | -0.34 | Destabilizing | 0.006 | N | 0.284 | neutral | D | 0.534270265 | None | None | N |
E/F | 0.421 | ambiguous | 0.428 | ambiguous | -0.226 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
E/G | 0.1182 | likely_benign | 0.1206 | benign | -0.622 | Destabilizing | 0.822 | D | 0.685 | prob.neutral | D | 0.529400166 | None | None | N |
E/H | 0.2856 | likely_benign | 0.2932 | benign | -0.003 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | N |
E/I | 0.1287 | likely_benign | 0.1315 | benign | 0.089 | Stabilizing | 0.978 | D | 0.863 | deleterious | None | None | None | None | N |
E/K | 0.1103 | likely_benign | 0.1205 | benign | 0.351 | Stabilizing | 0.822 | D | 0.561 | neutral | N | 0.487262946 | None | None | N |
E/L | 0.1746 | likely_benign | 0.1747 | benign | 0.089 | Stabilizing | 0.978 | D | 0.836 | deleterious | None | None | None | None | N |
E/M | 0.2195 | likely_benign | 0.2307 | benign | 0.174 | Stabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | N |
E/N | 0.1302 | likely_benign | 0.1294 | benign | -0.053 | Destabilizing | 0.915 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/P | 0.2431 | likely_benign | 0.2261 | benign | -0.06 | Destabilizing | 0.978 | D | 0.825 | deleterious | None | None | None | None | N |
E/Q | 0.1088 | likely_benign | 0.1142 | benign | -0.003 | Destabilizing | 0.942 | D | 0.697 | prob.neutral | N | 0.492151244 | None | None | N |
E/R | 0.191 | likely_benign | 0.2065 | benign | 0.548 | Stabilizing | 0.978 | D | 0.74 | deleterious | None | None | None | None | N |
E/S | 0.1311 | likely_benign | 0.1318 | benign | -0.195 | Destabilizing | 0.754 | D | 0.565 | neutral | None | None | None | None | N |
E/T | 0.122 | likely_benign | 0.1214 | benign | -0.021 | Destabilizing | 0.956 | D | 0.759 | deleterious | None | None | None | None | N |
E/V | 0.0906 | likely_benign | 0.0897 | benign | -0.06 | Destabilizing | 0.971 | D | 0.805 | deleterious | N | 0.485683238 | None | None | N |
E/W | 0.6974 | likely_pathogenic | 0.7098 | pathogenic | -0.046 | Destabilizing | 0.998 | D | 0.836 | deleterious | None | None | None | None | N |
E/Y | 0.3139 | likely_benign | 0.3266 | benign | 0.025 | Stabilizing | 0.998 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.