Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27316 | 82171;82172;82173 | chr2:178564186;178564185;178564184 | chr2:179428913;179428912;179428911 |
N2AB | 25675 | 77248;77249;77250 | chr2:178564186;178564185;178564184 | chr2:179428913;179428912;179428911 |
N2A | 24748 | 74467;74468;74469 | chr2:178564186;178564185;178564184 | chr2:179428913;179428912;179428911 |
N2B | 18251 | 54976;54977;54978 | chr2:178564186;178564185;178564184 | chr2:179428913;179428912;179428911 |
Novex-1 | 18376 | 55351;55352;55353 | chr2:178564186;178564185;178564184 | chr2:179428913;179428912;179428911 |
Novex-2 | 18443 | 55552;55553;55554 | chr2:178564186;178564185;178564184 | chr2:179428913;179428912;179428911 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1704772471 | None | 0.059 | N | 0.211 | 0.289 | 0.566810639971 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs1704772471 | None | 0.059 | N | 0.211 | 0.289 | 0.566810639971 | gnomAD-4.0.0 | 6.57488E-06 | None | None | None | None | N | None | 0 | 6.55566E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3495 | ambiguous | 0.3662 | ambiguous | -2.099 | Highly Destabilizing | 0.919 | D | 0.346 | neutral | None | None | None | None | N |
L/C | 0.6067 | likely_pathogenic | 0.6584 | pathogenic | -1.465 | Destabilizing | 0.999 | D | 0.44 | neutral | None | None | None | None | N |
L/D | 0.887 | likely_pathogenic | 0.9253 | pathogenic | -1.354 | Destabilizing | 0.996 | D | 0.519 | neutral | None | None | None | None | N |
L/E | 0.6419 | likely_pathogenic | 0.7242 | pathogenic | -1.258 | Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | N |
L/F | 0.1639 | likely_benign | 0.1869 | benign | -1.335 | Destabilizing | 0.059 | N | 0.211 | neutral | N | 0.493705997 | None | None | N |
L/G | 0.7178 | likely_pathogenic | 0.7725 | pathogenic | -2.515 | Highly Destabilizing | 0.988 | D | 0.483 | neutral | None | None | None | None | N |
L/H | 0.5328 | ambiguous | 0.6256 | pathogenic | -1.575 | Destabilizing | 0.999 | D | 0.529 | neutral | D | 0.534220148 | None | None | N |
L/I | 0.0775 | likely_benign | 0.0726 | benign | -0.973 | Destabilizing | 0.046 | N | 0.137 | neutral | N | 0.451830601 | None | None | N |
L/K | 0.5625 | ambiguous | 0.6614 | pathogenic | -1.489 | Destabilizing | 0.996 | D | 0.466 | neutral | None | None | None | None | N |
L/M | 0.1081 | likely_benign | 0.1156 | benign | -0.9 | Destabilizing | 0.988 | D | 0.449 | neutral | None | None | None | None | N |
L/N | 0.6965 | likely_pathogenic | 0.7791 | pathogenic | -1.448 | Destabilizing | 0.996 | D | 0.521 | neutral | None | None | None | None | N |
L/P | 0.563 | ambiguous | 0.5866 | pathogenic | -1.321 | Destabilizing | 0.995 | D | 0.521 | neutral | D | 0.533966658 | None | None | N |
L/Q | 0.3966 | ambiguous | 0.4963 | ambiguous | -1.477 | Destabilizing | 0.996 | D | 0.484 | neutral | None | None | None | None | N |
L/R | 0.4631 | ambiguous | 0.5573 | ambiguous | -1.011 | Destabilizing | 0.995 | D | 0.478 | neutral | D | 0.545322964 | None | None | N |
L/S | 0.564 | ambiguous | 0.6402 | pathogenic | -2.18 | Highly Destabilizing | 0.988 | D | 0.406 | neutral | None | None | None | None | N |
L/T | 0.3086 | likely_benign | 0.3369 | benign | -1.935 | Destabilizing | 0.919 | D | 0.354 | neutral | None | None | None | None | N |
L/V | 0.1007 | likely_benign | 0.0948 | benign | -1.321 | Destabilizing | 0.103 | N | 0.177 | neutral | N | 0.47368874 | None | None | N |
L/W | 0.3215 | likely_benign | 0.3954 | ambiguous | -1.398 | Destabilizing | 0.999 | D | 0.532 | neutral | None | None | None | None | N |
L/Y | 0.4786 | ambiguous | 0.5513 | ambiguous | -1.203 | Destabilizing | 0.952 | D | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.