Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27317 | 82174;82175;82176 | chr2:178564183;178564182;178564181 | chr2:179428910;179428909;179428908 |
N2AB | 25676 | 77251;77252;77253 | chr2:178564183;178564182;178564181 | chr2:179428910;179428909;179428908 |
N2A | 24749 | 74470;74471;74472 | chr2:178564183;178564182;178564181 | chr2:179428910;179428909;179428908 |
N2B | 18252 | 54979;54980;54981 | chr2:178564183;178564182;178564181 | chr2:179428910;179428909;179428908 |
Novex-1 | 18377 | 55354;55355;55356 | chr2:178564183;178564182;178564181 | chr2:179428910;179428909;179428908 |
Novex-2 | 18444 | 55555;55556;55557 | chr2:178564183;178564182;178564181 | chr2:179428910;179428909;179428908 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1434330338 | -0.034 | 0.989 | D | 0.515 | 0.274 | 0.437634105008 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/Q | rs1434330338 | -0.034 | 0.989 | D | 0.515 | 0.274 | 0.437634105008 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1434330338 | -0.034 | 0.989 | D | 0.515 | 0.274 | 0.437634105008 | gnomAD-4.0.0 | 3.09867E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.3905E-06 | 1.09789E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1144 | likely_benign | 0.1132 | benign | -0.05 | Destabilizing | 0.989 | D | 0.563 | neutral | N | 0.490730132 | None | None | N |
E/C | 0.6838 | likely_pathogenic | 0.6871 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/D | 0.1023 | likely_benign | 0.1056 | benign | -0.258 | Destabilizing | 0.054 | N | 0.213 | neutral | N | 0.464122321 | None | None | N |
E/F | 0.5651 | likely_pathogenic | 0.5818 | pathogenic | -0.071 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/G | 0.0968 | likely_benign | 0.0958 | benign | -0.19 | Destabilizing | 0.978 | D | 0.547 | neutral | D | 0.528037726 | None | None | N |
E/H | 0.3303 | likely_benign | 0.3321 | benign | 0.399 | Stabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
E/I | 0.2368 | likely_benign | 0.2382 | benign | 0.264 | Stabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/K | 0.1001 | likely_benign | 0.1038 | benign | 0.481 | Stabilizing | 0.978 | D | 0.558 | neutral | N | 0.496423953 | None | None | N |
E/L | 0.2304 | likely_benign | 0.2297 | benign | 0.264 | Stabilizing | 0.998 | D | 0.664 | neutral | None | None | None | None | N |
E/M | 0.3204 | likely_benign | 0.3181 | benign | 0.124 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
E/N | 0.1903 | likely_benign | 0.1899 | benign | 0.232 | Stabilizing | 0.983 | D | 0.525 | neutral | None | None | None | None | N |
E/P | 0.2903 | likely_benign | 0.2834 | benign | 0.178 | Stabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
E/Q | 0.1134 | likely_benign | 0.1111 | benign | 0.251 | Stabilizing | 0.989 | D | 0.515 | neutral | D | 0.534808983 | None | None | N |
E/R | 0.1737 | likely_benign | 0.1811 | benign | 0.675 | Stabilizing | 0.998 | D | 0.557 | neutral | None | None | None | None | N |
E/S | 0.1465 | likely_benign | 0.1436 | benign | 0.095 | Stabilizing | 0.983 | D | 0.531 | neutral | None | None | None | None | N |
E/T | 0.1496 | likely_benign | 0.1479 | benign | 0.214 | Stabilizing | 0.992 | D | 0.557 | neutral | None | None | None | None | N |
E/V | 0.1442 | likely_benign | 0.1425 | benign | 0.178 | Stabilizing | 0.999 | D | 0.569 | neutral | N | 0.487807257 | None | None | N |
E/W | 0.7422 | likely_pathogenic | 0.7597 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/Y | 0.467 | ambiguous | 0.4897 | ambiguous | 0.158 | Stabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.