Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27325 | 82198;82199;82200 | chr2:178564159;178564158;178564157 | chr2:179428886;179428885;179428884 |
N2AB | 25684 | 77275;77276;77277 | chr2:178564159;178564158;178564157 | chr2:179428886;179428885;179428884 |
N2A | 24757 | 74494;74495;74496 | chr2:178564159;178564158;178564157 | chr2:179428886;179428885;179428884 |
N2B | 18260 | 55003;55004;55005 | chr2:178564159;178564158;178564157 | chr2:179428886;179428885;179428884 |
Novex-1 | 18385 | 55378;55379;55380 | chr2:178564159;178564158;178564157 | chr2:179428886;179428885;179428884 |
Novex-2 | 18452 | 55579;55580;55581 | chr2:178564159;178564158;178564157 | chr2:179428886;179428885;179428884 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.999 | D | 0.823 | 0.639 | 0.853896731775 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85835E-06 | 0 | 0 |
I/T | rs1226922213 | -2.21 | 0.989 | N | 0.643 | 0.595 | 0.816803860896 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6943 | likely_pathogenic | 0.7623 | pathogenic | -2.214 | Highly Destabilizing | 0.992 | D | 0.522 | neutral | None | None | None | None | N |
I/C | 0.777 | likely_pathogenic | 0.8174 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/D | 0.9333 | likely_pathogenic | 0.9516 | pathogenic | -1.749 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
I/E | 0.7783 | likely_pathogenic | 0.8257 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
I/F | 0.2205 | likely_benign | 0.2658 | benign | -1.402 | Destabilizing | 0.998 | D | 0.619 | neutral | N | 0.49163472 | None | None | N |
I/G | 0.8564 | likely_pathogenic | 0.8954 | pathogenic | -2.659 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
I/H | 0.7357 | likely_pathogenic | 0.793 | pathogenic | -1.909 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
I/K | 0.4992 | ambiguous | 0.5785 | pathogenic | -1.597 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
I/L | 0.1756 | likely_benign | 0.2025 | benign | -0.998 | Destabilizing | 0.889 | D | 0.401 | neutral | N | 0.487378304 | None | None | N |
I/M | 0.1078 | likely_benign | 0.1218 | benign | -0.852 | Destabilizing | 0.998 | D | 0.641 | neutral | D | 0.536907926 | None | None | N |
I/N | 0.5499 | ambiguous | 0.6295 | pathogenic | -1.531 | Destabilizing | 0.999 | D | 0.823 | deleterious | D | 0.527642647 | None | None | N |
I/P | 0.9624 | likely_pathogenic | 0.9708 | pathogenic | -1.376 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
I/Q | 0.6117 | likely_pathogenic | 0.6899 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/R | 0.4189 | ambiguous | 0.5049 | ambiguous | -1.121 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
I/S | 0.6534 | likely_pathogenic | 0.7255 | pathogenic | -2.26 | Highly Destabilizing | 0.998 | D | 0.709 | prob.delet. | N | 0.517665467 | None | None | N |
I/T | 0.5761 | likely_pathogenic | 0.6561 | pathogenic | -2.023 | Highly Destabilizing | 0.989 | D | 0.643 | neutral | N | 0.506954271 | None | None | N |
I/V | 0.1102 | likely_benign | 0.1297 | benign | -1.376 | Destabilizing | 0.333 | N | 0.221 | neutral | N | 0.510025182 | None | None | N |
I/W | 0.7581 | likely_pathogenic | 0.7955 | pathogenic | -1.566 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
I/Y | 0.5774 | likely_pathogenic | 0.637 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.