Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27329 | 82210;82211;82212 | chr2:178564147;178564146;178564145 | chr2:179428874;179428873;179428872 |
N2AB | 25688 | 77287;77288;77289 | chr2:178564147;178564146;178564145 | chr2:179428874;179428873;179428872 |
N2A | 24761 | 74506;74507;74508 | chr2:178564147;178564146;178564145 | chr2:179428874;179428873;179428872 |
N2B | 18264 | 55015;55016;55017 | chr2:178564147;178564146;178564145 | chr2:179428874;179428873;179428872 |
Novex-1 | 18389 | 55390;55391;55392 | chr2:178564147;178564146;178564145 | chr2:179428874;179428873;179428872 |
Novex-2 | 18456 | 55591;55592;55593 | chr2:178564147;178564146;178564145 | chr2:179428874;179428873;179428872 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.012 | N | 0.195 | 0.067 | 0.0846915920261 | gnomAD-4.0.0 | 4.78953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29641E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1939 | likely_benign | 0.1734 | benign | -0.517 | Destabilizing | 0.067 | N | 0.339 | neutral | None | None | None | None | N |
I/C | 0.5886 | likely_pathogenic | 0.5475 | ambiguous | -0.692 | Destabilizing | 0.935 | D | 0.237 | neutral | None | None | None | None | N |
I/D | 0.4007 | ambiguous | 0.3569 | ambiguous | -0.273 | Destabilizing | 0.791 | D | 0.299 | neutral | None | None | None | None | N |
I/E | 0.3352 | likely_benign | 0.3054 | benign | -0.362 | Destabilizing | 0.555 | D | 0.325 | neutral | None | None | None | None | N |
I/F | 0.1053 | likely_benign | 0.1009 | benign | -0.6 | Destabilizing | None | N | 0.171 | neutral | N | 0.466481396 | None | None | N |
I/G | 0.4154 | ambiguous | 0.3708 | ambiguous | -0.652 | Destabilizing | 0.555 | D | 0.347 | neutral | None | None | None | None | N |
I/H | 0.3355 | likely_benign | 0.3089 | benign | 0.031 | Stabilizing | 0.935 | D | 0.245 | neutral | None | None | None | None | N |
I/K | 0.2777 | likely_benign | 0.2624 | benign | -0.356 | Destabilizing | 0.555 | D | 0.337 | neutral | None | None | None | None | N |
I/L | 0.0666 | likely_benign | 0.0591 | benign | -0.284 | Destabilizing | None | N | 0.133 | neutral | N | 0.407395807 | None | None | N |
I/M | 0.0878 | likely_benign | 0.0821 | benign | -0.508 | Destabilizing | 0.012 | N | 0.166 | neutral | N | 0.477602466 | None | None | N |
I/N | 0.1611 | likely_benign | 0.1536 | benign | -0.202 | Destabilizing | 0.741 | D | 0.287 | neutral | N | 0.409067888 | None | None | N |
I/P | 0.2912 | likely_benign | 0.2516 | benign | -0.331 | Destabilizing | 0.791 | D | 0.287 | neutral | None | None | None | None | N |
I/Q | 0.2817 | likely_benign | 0.2602 | benign | -0.397 | Destabilizing | 0.555 | D | 0.275 | neutral | None | None | None | None | N |
I/R | 0.2097 | likely_benign | 0.1994 | benign | 0.154 | Stabilizing | 0.555 | D | 0.297 | neutral | None | None | None | None | N |
I/S | 0.1705 | likely_benign | 0.1649 | benign | -0.594 | Destabilizing | 0.211 | N | 0.359 | neutral | N | 0.416089861 | None | None | N |
I/T | 0.1701 | likely_benign | 0.1498 | benign | -0.577 | Destabilizing | 0.117 | N | 0.312 | neutral | N | 0.447279559 | None | None | N |
I/V | 0.0745 | likely_benign | 0.0694 | benign | -0.331 | Destabilizing | 0.012 | N | 0.195 | neutral | N | 0.431811462 | None | None | N |
I/W | 0.5353 | ambiguous | 0.5098 | ambiguous | -0.63 | Destabilizing | 0.935 | D | 0.255 | neutral | None | None | None | None | N |
I/Y | 0.317 | likely_benign | 0.3033 | benign | -0.384 | Destabilizing | 0.235 | N | 0.333 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.