Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27330 | 82213;82214;82215 | chr2:178564144;178564143;178564142 | chr2:179428871;179428870;179428869 |
N2AB | 25689 | 77290;77291;77292 | chr2:178564144;178564143;178564142 | chr2:179428871;179428870;179428869 |
N2A | 24762 | 74509;74510;74511 | chr2:178564144;178564143;178564142 | chr2:179428871;179428870;179428869 |
N2B | 18265 | 55018;55019;55020 | chr2:178564144;178564143;178564142 | chr2:179428871;179428870;179428869 |
Novex-1 | 18390 | 55393;55394;55395 | chr2:178564144;178564143;178564142 | chr2:179428871;179428870;179428869 |
Novex-2 | 18457 | 55594;55595;55596 | chr2:178564144;178564143;178564142 | chr2:179428871;179428870;179428869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs1205501595 | 0.075 | 0.005 | N | 0.116 | 0.166 | 0.273070737957 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Q/E | rs1205501595 | 0.075 | 0.005 | N | 0.116 | 0.166 | 0.273070737957 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2112 | likely_benign | 0.2127 | benign | -0.181 | Destabilizing | 0.688 | D | 0.341 | neutral | None | None | None | None | N |
Q/C | 0.5913 | likely_pathogenic | 0.5869 | pathogenic | 0.119 | Stabilizing | 0.998 | D | 0.491 | neutral | None | None | None | None | N |
Q/D | 0.2591 | likely_benign | 0.2515 | benign | 0.206 | Stabilizing | 0.525 | D | 0.256 | neutral | None | None | None | None | N |
Q/E | 0.07 | likely_benign | 0.07 | benign | 0.206 | Stabilizing | 0.005 | N | 0.116 | neutral | N | 0.411037197 | None | None | N |
Q/F | 0.5965 | likely_pathogenic | 0.597 | pathogenic | -0.271 | Destabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | N |
Q/G | 0.1839 | likely_benign | 0.1837 | benign | -0.4 | Destabilizing | 0.915 | D | 0.408 | neutral | None | None | None | None | N |
Q/H | 0.1974 | likely_benign | 0.1825 | benign | -0.185 | Destabilizing | 0.966 | D | 0.41 | neutral | N | 0.454425402 | None | None | N |
Q/I | 0.4489 | ambiguous | 0.4447 | ambiguous | 0.314 | Stabilizing | 0.949 | D | 0.481 | neutral | None | None | None | None | N |
Q/K | 0.1209 | likely_benign | 0.1085 | benign | 0.055 | Stabilizing | 0.454 | N | 0.275 | neutral | N | 0.382754518 | None | None | N |
Q/L | 0.1359 | likely_benign | 0.1367 | benign | 0.314 | Stabilizing | 0.801 | D | 0.408 | neutral | N | 0.443208331 | None | None | N |
Q/M | 0.3613 | ambiguous | 0.3624 | ambiguous | 0.398 | Stabilizing | 0.991 | D | 0.418 | neutral | None | None | None | None | N |
Q/N | 0.2316 | likely_benign | 0.2307 | benign | -0.339 | Destabilizing | 0.842 | D | 0.279 | neutral | None | None | None | None | N |
Q/P | 0.2515 | likely_benign | 0.2372 | benign | 0.179 | Stabilizing | 0.891 | D | 0.402 | neutral | N | 0.465373115 | None | None | N |
Q/R | 0.1101 | likely_benign | 0.1046 | benign | 0.192 | Stabilizing | 0.801 | D | 0.297 | neutral | N | 0.421139548 | None | None | N |
Q/S | 0.2023 | likely_benign | 0.2056 | benign | -0.355 | Destabilizing | 0.525 | D | 0.279 | neutral | None | None | None | None | N |
Q/T | 0.178 | likely_benign | 0.1736 | benign | -0.19 | Destabilizing | 0.029 | N | 0.166 | neutral | None | None | None | None | N |
Q/V | 0.2898 | likely_benign | 0.2877 | benign | 0.179 | Stabilizing | 0.842 | D | 0.406 | neutral | None | None | None | None | N |
Q/W | 0.4359 | ambiguous | 0.4083 | ambiguous | -0.257 | Destabilizing | 0.998 | D | 0.497 | neutral | None | None | None | None | N |
Q/Y | 0.3669 | ambiguous | 0.3629 | ambiguous | -0.002 | Destabilizing | 0.991 | D | 0.441 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.