Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2735 | 8428;8429;8430 | chr2:178770589;178770588;178770587 | chr2:179635316;179635315;179635314 |
N2AB | 2735 | 8428;8429;8430 | chr2:178770589;178770588;178770587 | chr2:179635316;179635315;179635314 |
N2A | 2735 | 8428;8429;8430 | chr2:178770589;178770588;178770587 | chr2:179635316;179635315;179635314 |
N2B | 2689 | 8290;8291;8292 | chr2:178770589;178770588;178770587 | chr2:179635316;179635315;179635314 |
Novex-1 | 2689 | 8290;8291;8292 | chr2:178770589;178770588;178770587 | chr2:179635316;179635315;179635314 |
Novex-2 | 2689 | 8290;8291;8292 | chr2:178770589;178770588;178770587 | chr2:179635316;179635315;179635314 |
Novex-3 | 2735 | 8428;8429;8430 | chr2:178770589;178770588;178770587 | chr2:179635316;179635315;179635314 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1352413380 | -1.445 | 0.958 | N | 0.554 | 0.327 | 0.662113396273 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.8E-06 | 0 |
V/A | rs1352413380 | -1.445 | 0.958 | N | 0.554 | 0.327 | 0.662113396273 | gnomAD-4.0.0 | 3.42038E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49648E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.475 | ambiguous | 0.5706 | pathogenic | -1.408 | Destabilizing | 0.958 | D | 0.554 | neutral | N | 0.507081171 | None | None | N |
V/C | 0.8906 | likely_pathogenic | 0.9211 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/D | 0.8207 | likely_pathogenic | 0.8918 | pathogenic | -1.198 | Destabilizing | 0.998 | D | 0.775 | deleterious | D | 0.656831713 | None | None | N |
V/E | 0.6719 | likely_pathogenic | 0.7712 | pathogenic | -1.118 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/F | 0.4239 | ambiguous | 0.4858 | ambiguous | -0.969 | Destabilizing | 0.988 | D | 0.756 | deleterious | D | 0.664228712 | None | None | N |
V/G | 0.5655 | likely_pathogenic | 0.6679 | pathogenic | -1.737 | Destabilizing | 0.994 | D | 0.749 | deleterious | D | 0.600339193 | None | None | N |
V/H | 0.9131 | likely_pathogenic | 0.9432 | pathogenic | -0.984 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/I | 0.1042 | likely_benign | 0.1092 | benign | -0.567 | Destabilizing | 0.067 | N | 0.308 | neutral | N | 0.509555358 | None | None | N |
V/K | 0.7887 | likely_pathogenic | 0.856 | pathogenic | -1.076 | Destabilizing | 0.995 | D | 0.742 | deleterious | None | None | None | None | N |
V/L | 0.4353 | ambiguous | 0.4737 | ambiguous | -0.567 | Destabilizing | 0.618 | D | 0.517 | neutral | D | 0.598670852 | None | None | N |
V/M | 0.2714 | likely_benign | 0.2957 | benign | -0.748 | Destabilizing | 0.991 | D | 0.759 | deleterious | None | None | None | None | N |
V/N | 0.7647 | likely_pathogenic | 0.8323 | pathogenic | -1.125 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
V/P | 0.8921 | likely_pathogenic | 0.9263 | pathogenic | -0.818 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
V/Q | 0.7184 | likely_pathogenic | 0.7927 | pathogenic | -1.139 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
V/R | 0.7457 | likely_pathogenic | 0.8186 | pathogenic | -0.731 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
V/S | 0.6278 | likely_pathogenic | 0.7278 | pathogenic | -1.643 | Destabilizing | 0.995 | D | 0.748 | deleterious | None | None | None | None | N |
V/T | 0.497 | ambiguous | 0.5842 | pathogenic | -1.43 | Destabilizing | 0.968 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/W | 0.9539 | likely_pathogenic | 0.968 | pathogenic | -1.117 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
V/Y | 0.8537 | likely_pathogenic | 0.8998 | pathogenic | -0.819 | Destabilizing | 0.995 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.