Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27351 | 82276;82277;82278 | chr2:178564081;178564080;178564079 | chr2:179428808;179428807;179428806 |
N2AB | 25710 | 77353;77354;77355 | chr2:178564081;178564080;178564079 | chr2:179428808;179428807;179428806 |
N2A | 24783 | 74572;74573;74574 | chr2:178564081;178564080;178564079 | chr2:179428808;179428807;179428806 |
N2B | 18286 | 55081;55082;55083 | chr2:178564081;178564080;178564079 | chr2:179428808;179428807;179428806 |
Novex-1 | 18411 | 55456;55457;55458 | chr2:178564081;178564080;178564079 | chr2:179428808;179428807;179428806 |
Novex-2 | 18478 | 55657;55658;55659 | chr2:178564081;178564080;178564079 | chr2:179428808;179428807;179428806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | D | 0.841 | 0.596 | 0.882090980265 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
L/V | rs1398866994 | -1.626 | 0.996 | N | 0.637 | 0.298 | 0.596316647014 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs1398866994 | -1.626 | 0.996 | N | 0.637 | 0.298 | 0.596316647014 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | I | None | 5.65547E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6258 | likely_pathogenic | 0.6349 | pathogenic | -2.455 | Highly Destabilizing | 0.813 | D | 0.447 | neutral | None | None | None | None | I |
L/C | 0.741 | likely_pathogenic | 0.7538 | pathogenic | -1.96 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
L/D | 0.9982 | likely_pathogenic | 0.9985 | pathogenic | -2.281 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
L/E | 0.9903 | likely_pathogenic | 0.9918 | pathogenic | -2.143 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
L/F | 0.7274 | likely_pathogenic | 0.7728 | pathogenic | -1.582 | Destabilizing | 1.0 | D | 0.838 | deleterious | N | 0.515673549 | None | None | I |
L/G | 0.9514 | likely_pathogenic | 0.9587 | pathogenic | -2.933 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
L/H | 0.9846 | likely_pathogenic | 0.9866 | pathogenic | -2.2 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.527536834 | None | None | I |
L/I | 0.1461 | likely_benign | 0.1624 | benign | -1.123 | Destabilizing | 0.998 | D | 0.601 | neutral | N | 0.481209332 | None | None | I |
L/K | 0.9915 | likely_pathogenic | 0.9926 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
L/M | 0.2636 | likely_benign | 0.2766 | benign | -1.098 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
L/N | 0.9872 | likely_pathogenic | 0.9884 | pathogenic | -1.961 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
L/P | 0.9952 | likely_pathogenic | 0.9965 | pathogenic | -1.542 | Destabilizing | 0.999 | D | 0.848 | deleterious | D | 0.527283344 | None | None | I |
L/Q | 0.9636 | likely_pathogenic | 0.9677 | pathogenic | -1.973 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
L/R | 0.978 | likely_pathogenic | 0.9813 | pathogenic | -1.4 | Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.527283344 | None | None | I |
L/S | 0.9395 | likely_pathogenic | 0.9486 | pathogenic | -2.718 | Highly Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | I |
L/T | 0.8127 | likely_pathogenic | 0.8305 | pathogenic | -2.439 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | I |
L/V | 0.1278 | likely_benign | 0.1326 | benign | -1.542 | Destabilizing | 0.996 | D | 0.637 | neutral | N | 0.458804141 | None | None | I |
L/W | 0.9747 | likely_pathogenic | 0.9819 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
L/Y | 0.9614 | likely_pathogenic | 0.9687 | pathogenic | -1.556 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.