Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27353 | 82282;82283;82284 | chr2:178564075;178564074;178564073 | chr2:179428802;179428801;179428800 |
N2AB | 25712 | 77359;77360;77361 | chr2:178564075;178564074;178564073 | chr2:179428802;179428801;179428800 |
N2A | 24785 | 74578;74579;74580 | chr2:178564075;178564074;178564073 | chr2:179428802;179428801;179428800 |
N2B | 18288 | 55087;55088;55089 | chr2:178564075;178564074;178564073 | chr2:179428802;179428801;179428800 |
Novex-1 | 18413 | 55462;55463;55464 | chr2:178564075;178564074;178564073 | chr2:179428802;179428801;179428800 |
Novex-2 | 18480 | 55663;55664;55665 | chr2:178564075;178564074;178564073 | chr2:179428802;179428801;179428800 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1704729039 | None | 0.999 | N | 0.547 | 0.604 | 0.316198179892 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9882 | likely_pathogenic | 0.9918 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
N/C | 0.9061 | likely_pathogenic | 0.9282 | pathogenic | 0.161 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
N/D | 0.989 | likely_pathogenic | 0.9918 | pathogenic | -0.888 | Destabilizing | 0.999 | D | 0.582 | neutral | D | 0.549461025 | None | None | I |
N/E | 0.9984 | likely_pathogenic | 0.9988 | pathogenic | -0.894 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | I |
N/F | 0.9986 | likely_pathogenic | 0.9987 | pathogenic | -0.97 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
N/G | 0.9796 | likely_pathogenic | 0.9831 | pathogenic | -0.766 | Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | I |
N/H | 0.9587 | likely_pathogenic | 0.9644 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.550728473 | None | None | I |
N/I | 0.9864 | likely_pathogenic | 0.9907 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.521356818 | None | None | I |
N/K | 0.9982 | likely_pathogenic | 0.9986 | pathogenic | -0.031 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | D | 0.538700604 | None | None | I |
N/L | 0.9709 | likely_pathogenic | 0.976 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
N/M | 0.989 | likely_pathogenic | 0.9912 | pathogenic | 0.598 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
N/P | 0.9955 | likely_pathogenic | 0.9964 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
N/Q | 0.9974 | likely_pathogenic | 0.9978 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
N/R | 0.9958 | likely_pathogenic | 0.9966 | pathogenic | 0.115 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
N/S | 0.636 | likely_pathogenic | 0.7033 | pathogenic | -0.416 | Destabilizing | 0.999 | D | 0.547 | neutral | N | 0.503844766 | None | None | I |
N/T | 0.9214 | likely_pathogenic | 0.9421 | pathogenic | -0.283 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | D | 0.538193625 | None | None | I |
N/V | 0.9783 | likely_pathogenic | 0.9851 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
N/W | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.875 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
N/Y | 0.9904 | likely_pathogenic | 0.9914 | pathogenic | -0.582 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.550728473 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.