Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27358 | 82297;82298;82299 | chr2:178564060;178564059;178564058 | chr2:179428787;179428786;179428785 |
N2AB | 25717 | 77374;77375;77376 | chr2:178564060;178564059;178564058 | chr2:179428787;179428786;179428785 |
N2A | 24790 | 74593;74594;74595 | chr2:178564060;178564059;178564058 | chr2:179428787;179428786;179428785 |
N2B | 18293 | 55102;55103;55104 | chr2:178564060;178564059;178564058 | chr2:179428787;179428786;179428785 |
Novex-1 | 18418 | 55477;55478;55479 | chr2:178564060;178564059;178564058 | chr2:179428787;179428786;179428785 |
Novex-2 | 18485 | 55678;55679;55680 | chr2:178564060;178564059;178564058 | chr2:179428787;179428786;179428785 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1483331348 | 0.024 | 0.988 | N | 0.676 | 0.391 | 0.42573502686 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/T | rs1483331348 | 0.024 | 0.988 | N | 0.676 | 0.391 | 0.42573502686 | gnomAD-4.0.0 | 2.05265E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69848E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3376 | likely_benign | 0.3947 | ambiguous | -0.029 | Destabilizing | 0.968 | D | 0.604 | neutral | None | None | None | None | I |
K/C | 0.6774 | likely_pathogenic | 0.6948 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
K/D | 0.7878 | likely_pathogenic | 0.8381 | pathogenic | 0.194 | Stabilizing | 0.938 | D | 0.669 | neutral | None | None | None | None | I |
K/E | 0.2769 | likely_benign | 0.3487 | ambiguous | 0.217 | Stabilizing | 0.067 | N | 0.307 | neutral | N | 0.492730287 | None | None | I |
K/F | 0.8419 | likely_pathogenic | 0.8765 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/G | 0.6476 | likely_pathogenic | 0.7034 | pathogenic | -0.233 | Destabilizing | 0.991 | D | 0.672 | neutral | None | None | None | None | I |
K/H | 0.3994 | ambiguous | 0.4331 | ambiguous | -0.431 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | I |
K/I | 0.3743 | ambiguous | 0.4492 | ambiguous | 0.428 | Stabilizing | 0.995 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/L | 0.4431 | ambiguous | 0.5317 | ambiguous | 0.428 | Stabilizing | 0.991 | D | 0.67 | neutral | None | None | None | None | I |
K/M | 0.2845 | likely_benign | 0.342 | ambiguous | 0.105 | Stabilizing | 0.999 | D | 0.655 | neutral | N | 0.498178405 | None | None | I |
K/N | 0.6314 | likely_pathogenic | 0.696 | pathogenic | 0.052 | Stabilizing | 0.988 | D | 0.65 | neutral | D | 0.525997499 | None | None | I |
K/P | 0.9761 | likely_pathogenic | 0.9807 | pathogenic | 0.304 | Stabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/Q | 0.1594 | likely_benign | 0.1843 | benign | -0.063 | Destabilizing | 0.976 | D | 0.66 | neutral | N | 0.484540694 | None | None | I |
K/R | 0.0848 | likely_benign | 0.0872 | benign | -0.067 | Destabilizing | 0.958 | D | 0.563 | neutral | N | 0.45552148 | None | None | I |
K/S | 0.5228 | ambiguous | 0.5857 | pathogenic | -0.459 | Destabilizing | 0.968 | D | 0.605 | neutral | None | None | None | None | I |
K/T | 0.2039 | likely_benign | 0.2449 | benign | -0.278 | Destabilizing | 0.988 | D | 0.676 | prob.neutral | N | 0.480571854 | None | None | I |
K/V | 0.2936 | likely_benign | 0.3527 | ambiguous | 0.304 | Stabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | I |
K/W | 0.887 | likely_pathogenic | 0.9029 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/Y | 0.7393 | likely_pathogenic | 0.7728 | pathogenic | 0.119 | Stabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.