Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27359 | 82300;82301;82302 | chr2:178564057;178564056;178564055 | chr2:179428784;179428783;179428782 |
N2AB | 25718 | 77377;77378;77379 | chr2:178564057;178564056;178564055 | chr2:179428784;179428783;179428782 |
N2A | 24791 | 74596;74597;74598 | chr2:178564057;178564056;178564055 | chr2:179428784;179428783;179428782 |
N2B | 18294 | 55105;55106;55107 | chr2:178564057;178564056;178564055 | chr2:179428784;179428783;179428782 |
Novex-1 | 18419 | 55480;55481;55482 | chr2:178564057;178564056;178564055 | chr2:179428784;179428783;179428782 |
Novex-2 | 18486 | 55681;55682;55683 | chr2:178564057;178564056;178564055 | chr2:179428784;179428783;179428782 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1704715651 | None | 0.106 | D | 0.616 | 0.389 | 0.227934060464 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/P | rs1704715651 | None | 0.106 | D | 0.616 | 0.389 | 0.227934060464 | gnomAD-4.0.0 | 6.57774E-06 | None | None | None | None | I | None | 2.41441E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0769 | likely_benign | 0.0781 | benign | -0.29 | Destabilizing | 0.005 | N | 0.322 | neutral | N | 0.497595747 | None | None | I |
S/C | 0.0932 | likely_benign | 0.0957 | benign | -0.335 | Destabilizing | 0.612 | D | 0.541 | neutral | D | 0.540351624 | None | None | I |
S/D | 0.2877 | likely_benign | 0.2927 | benign | 0.222 | Stabilizing | 0.072 | N | 0.411 | neutral | None | None | None | None | I |
S/E | 0.3476 | ambiguous | 0.3555 | ambiguous | 0.22 | Stabilizing | 0.038 | N | 0.423 | neutral | None | None | None | None | I |
S/F | 0.142 | likely_benign | 0.1523 | benign | -0.531 | Destabilizing | 0.171 | N | 0.579 | neutral | N | 0.513346599 | None | None | I |
S/G | 0.1115 | likely_benign | 0.1126 | benign | -0.523 | Destabilizing | 0.031 | N | 0.415 | neutral | None | None | None | None | I |
S/H | 0.2551 | likely_benign | 0.2597 | benign | -0.959 | Destabilizing | 0.356 | N | 0.548 | neutral | None | None | None | None | I |
S/I | 0.1119 | likely_benign | 0.1237 | benign | 0.21 | Stabilizing | 0.001 | N | 0.365 | neutral | None | None | None | None | I |
S/K | 0.5396 | ambiguous | 0.537 | ambiguous | -0.477 | Destabilizing | 0.038 | N | 0.417 | neutral | None | None | None | None | I |
S/L | 0.0826 | likely_benign | 0.0842 | benign | 0.21 | Stabilizing | 0.007 | N | 0.421 | neutral | None | None | None | None | I |
S/M | 0.12 | likely_benign | 0.126 | benign | 0.117 | Stabilizing | 0.003 | N | 0.259 | neutral | None | None | None | None | I |
S/N | 0.0912 | likely_benign | 0.0911 | benign | -0.445 | Destabilizing | 0.072 | N | 0.412 | neutral | None | None | None | None | I |
S/P | 0.558 | ambiguous | 0.4184 | ambiguous | 0.079 | Stabilizing | 0.106 | N | 0.616 | neutral | D | 0.528323756 | None | None | I |
S/Q | 0.3683 | ambiguous | 0.3658 | ambiguous | -0.483 | Destabilizing | 0.003 | N | 0.289 | neutral | None | None | None | None | I |
S/R | 0.4886 | ambiguous | 0.492 | ambiguous | -0.443 | Destabilizing | 0.072 | N | 0.596 | neutral | None | None | None | None | I |
S/T | 0.0617 | likely_benign | 0.0647 | benign | -0.425 | Destabilizing | None | N | 0.137 | neutral | N | 0.485052167 | None | None | I |
S/V | 0.1148 | likely_benign | 0.1219 | benign | 0.079 | Stabilizing | 0.016 | N | 0.446 | neutral | None | None | None | None | I |
S/W | 0.2582 | likely_benign | 0.2804 | benign | -0.625 | Destabilizing | 0.864 | D | 0.542 | neutral | None | None | None | None | I |
S/Y | 0.1239 | likely_benign | 0.1374 | benign | -0.297 | Destabilizing | 0.295 | N | 0.537 | neutral | N | 0.508004228 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.