Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27360 | 82303;82304;82305 | chr2:178564054;178564053;178564052 | chr2:179428781;179428780;179428779 |
N2AB | 25719 | 77380;77381;77382 | chr2:178564054;178564053;178564052 | chr2:179428781;179428780;179428779 |
N2A | 24792 | 74599;74600;74601 | chr2:178564054;178564053;178564052 | chr2:179428781;179428780;179428779 |
N2B | 18295 | 55108;55109;55110 | chr2:178564054;178564053;178564052 | chr2:179428781;179428780;179428779 |
Novex-1 | 18420 | 55483;55484;55485 | chr2:178564054;178564053;178564052 | chr2:179428781;179428780;179428779 |
Novex-2 | 18487 | 55684;55685;55686 | chr2:178564054;178564053;178564052 | chr2:179428781;179428780;179428779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs764393169 | -0.292 | 0.164 | N | 0.339 | 0.095 | 0.533131753447 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/T | None | None | 0.684 | N | 0.593 | 0.34 | 0.651931416193 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02462E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5674 | likely_pathogenic | 0.6265 | pathogenic | -1.269 | Destabilizing | 0.373 | N | 0.529 | neutral | None | None | None | None | N |
I/C | 0.6726 | likely_pathogenic | 0.709 | pathogenic | -1.032 | Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | N |
I/D | 0.894 | likely_pathogenic | 0.9234 | pathogenic | -0.682 | Destabilizing | 0.91 | D | 0.716 | prob.delet. | None | None | None | None | N |
I/E | 0.7931 | likely_pathogenic | 0.8423 | pathogenic | -0.653 | Destabilizing | 0.59 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/F | 0.124 | likely_benign | 0.1444 | benign | -0.704 | Destabilizing | 0.953 | D | 0.617 | neutral | None | None | None | None | N |
I/G | 0.8602 | likely_pathogenic | 0.889 | pathogenic | -1.581 | Destabilizing | 0.742 | D | 0.708 | prob.delet. | None | None | None | None | N |
I/H | 0.611 | likely_pathogenic | 0.677 | pathogenic | -0.6 | Destabilizing | 0.987 | D | 0.69 | prob.neutral | None | None | None | None | N |
I/K | 0.6511 | likely_pathogenic | 0.7184 | pathogenic | -0.971 | Destabilizing | 0.007 | N | 0.519 | neutral | N | 0.446475136 | None | None | N |
I/L | 0.1015 | likely_benign | 0.107 | benign | -0.487 | Destabilizing | 0.164 | N | 0.339 | neutral | N | 0.451057023 | None | None | N |
I/M | 0.1215 | likely_benign | 0.1352 | benign | -0.619 | Destabilizing | 0.939 | D | 0.634 | neutral | N | 0.481206572 | None | None | N |
I/N | 0.5021 | ambiguous | 0.571 | pathogenic | -0.974 | Destabilizing | 0.91 | D | 0.718 | prob.delet. | None | None | None | None | N |
I/P | 0.9621 | likely_pathogenic | 0.9657 | pathogenic | -0.717 | Destabilizing | 0.953 | D | 0.722 | prob.delet. | None | None | None | None | N |
I/Q | 0.6423 | likely_pathogenic | 0.7036 | pathogenic | -1.051 | Destabilizing | 0.91 | D | 0.718 | prob.delet. | None | None | None | None | N |
I/R | 0.5462 | ambiguous | 0.6294 | pathogenic | -0.44 | Destabilizing | 0.792 | D | 0.715 | prob.delet. | N | 0.474760602 | None | None | N |
I/S | 0.505 | ambiguous | 0.5769 | pathogenic | -1.565 | Destabilizing | 0.742 | D | 0.657 | neutral | None | None | None | None | N |
I/T | 0.4543 | ambiguous | 0.5195 | ambiguous | -1.407 | Destabilizing | 0.684 | D | 0.593 | neutral | N | 0.44391762 | None | None | N |
I/V | 0.0812 | likely_benign | 0.0894 | benign | -0.717 | Destabilizing | 0.004 | N | 0.161 | neutral | N | 0.378175418 | None | None | N |
I/W | 0.775 | likely_pathogenic | 0.8146 | pathogenic | -0.774 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/Y | 0.4913 | ambiguous | 0.5342 | ambiguous | -0.551 | Destabilizing | 0.984 | D | 0.658 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.