Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27365 | 82318;82319;82320 | chr2:178564039;178564038;178564037 | chr2:179428766;179428765;179428764 |
N2AB | 25724 | 77395;77396;77397 | chr2:178564039;178564038;178564037 | chr2:179428766;179428765;179428764 |
N2A | 24797 | 74614;74615;74616 | chr2:178564039;178564038;178564037 | chr2:179428766;179428765;179428764 |
N2B | 18300 | 55123;55124;55125 | chr2:178564039;178564038;178564037 | chr2:179428766;179428765;179428764 |
Novex-1 | 18425 | 55498;55499;55500 | chr2:178564039;178564038;178564037 | chr2:179428766;179428765;179428764 |
Novex-2 | 18492 | 55699;55700;55701 | chr2:178564039;178564038;178564037 | chr2:179428766;179428765;179428764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.591 | 0.319 | 0.486567385682 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.586 | likely_pathogenic | 0.6816 | pathogenic | -0.387 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/C | 0.7525 | likely_pathogenic | 0.7985 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/D | 0.798 | likely_pathogenic | 0.8598 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/E | 0.3318 | likely_benign | 0.4301 | ambiguous | 0.217 | Stabilizing | 0.999 | D | 0.643 | neutral | N | 0.486617836 | None | None | I |
K/F | 0.866 | likely_pathogenic | 0.9126 | pathogenic | -0.05 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
K/G | 0.8003 | likely_pathogenic | 0.8722 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
K/H | 0.3407 | ambiguous | 0.3898 | ambiguous | -0.909 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
K/I | 0.4343 | ambiguous | 0.5027 | ambiguous | 0.526 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
K/L | 0.453 | ambiguous | 0.5264 | ambiguous | 0.526 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
K/M | 0.2854 | likely_benign | 0.3407 | ambiguous | 0.144 | Stabilizing | 1.0 | D | 0.629 | neutral | N | 0.516411246 | None | None | I |
K/N | 0.5775 | likely_pathogenic | 0.6788 | pathogenic | -0.435 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.485265164 | None | None | I |
K/P | 0.9833 | likely_pathogenic | 0.9907 | pathogenic | 0.252 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/Q | 0.1821 | likely_benign | 0.2214 | benign | -0.418 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.488668524 | None | None | I |
K/R | 0.0895 | likely_benign | 0.0983 | benign | -0.464 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.49586938 | None | None | I |
K/S | 0.6107 | likely_pathogenic | 0.7075 | pathogenic | -1.052 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/T | 0.2377 | likely_benign | 0.2969 | benign | -0.724 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.517319301 | None | None | I |
K/V | 0.4058 | ambiguous | 0.4658 | ambiguous | 0.252 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
K/W | 0.8232 | likely_pathogenic | 0.8823 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/Y | 0.7355 | likely_pathogenic | 0.8019 | pathogenic | 0.315 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.