Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27377 | 82354;82355;82356 | chr2:178564003;178564002;178564001 | chr2:179428730;179428729;179428728 |
N2AB | 25736 | 77431;77432;77433 | chr2:178564003;178564002;178564001 | chr2:179428730;179428729;179428728 |
N2A | 24809 | 74650;74651;74652 | chr2:178564003;178564002;178564001 | chr2:179428730;179428729;179428728 |
N2B | 18312 | 55159;55160;55161 | chr2:178564003;178564002;178564001 | chr2:179428730;179428729;179428728 |
Novex-1 | 18437 | 55534;55535;55536 | chr2:178564003;178564002;178564001 | chr2:179428730;179428729;179428728 |
Novex-2 | 18504 | 55735;55736;55737 | chr2:178564003;178564002;178564001 | chr2:179428730;179428729;179428728 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.056 | N | 0.653 | 0.34 | 0.664596153488 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99505E-07 | 0 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8502 | likely_pathogenic | 0.823 | pathogenic | -2.35 | Highly Destabilizing | 0.916 | D | 0.682 | prob.neutral | None | None | None | None | N |
L/C | 0.8193 | likely_pathogenic | 0.815 | pathogenic | -1.657 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/D | 0.9983 | likely_pathogenic | 0.9978 | pathogenic | -2.701 | Highly Destabilizing | 0.987 | D | 0.807 | deleterious | None | None | None | None | N |
L/E | 0.9865 | likely_pathogenic | 0.9835 | pathogenic | -2.465 | Highly Destabilizing | 0.975 | D | 0.812 | deleterious | None | None | None | None | N |
L/F | 0.4817 | ambiguous | 0.4963 | ambiguous | -1.319 | Destabilizing | 0.987 | D | 0.769 | deleterious | None | None | None | None | N |
L/G | 0.9768 | likely_pathogenic | 0.9704 | pathogenic | -2.896 | Highly Destabilizing | 0.975 | D | 0.815 | deleterious | None | None | None | None | N |
L/H | 0.9792 | likely_pathogenic | 0.9759 | pathogenic | -2.457 | Highly Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
L/I | 0.1116 | likely_benign | 0.1107 | benign | -0.773 | Destabilizing | 0.253 | N | 0.428 | neutral | None | None | None | None | N |
L/K | 0.9839 | likely_pathogenic | 0.9808 | pathogenic | -1.756 | Destabilizing | 0.975 | D | 0.777 | deleterious | None | None | None | None | N |
L/M | 0.201 | likely_benign | 0.2063 | benign | -0.851 | Destabilizing | 0.983 | D | 0.703 | prob.neutral | N | 0.48193012 | None | None | N |
L/N | 0.9885 | likely_pathogenic | 0.9847 | pathogenic | -2.121 | Highly Destabilizing | 0.987 | D | 0.811 | deleterious | None | None | None | None | N |
L/P | 0.9158 | likely_pathogenic | 0.9007 | pathogenic | -1.28 | Destabilizing | 0.056 | N | 0.653 | neutral | N | 0.506984877 | None | None | N |
L/Q | 0.9555 | likely_pathogenic | 0.9463 | pathogenic | -1.948 | Destabilizing | 0.983 | D | 0.774 | deleterious | N | 0.497262898 | None | None | N |
L/R | 0.9715 | likely_pathogenic | 0.967 | pathogenic | -1.584 | Destabilizing | 0.983 | D | 0.759 | deleterious | N | 0.493642047 | None | None | N |
L/S | 0.9709 | likely_pathogenic | 0.9615 | pathogenic | -2.782 | Highly Destabilizing | 0.975 | D | 0.781 | deleterious | None | None | None | None | N |
L/T | 0.9014 | likely_pathogenic | 0.875 | pathogenic | -2.401 | Highly Destabilizing | 0.975 | D | 0.759 | deleterious | None | None | None | None | N |
L/V | 0.1171 | likely_benign | 0.1168 | benign | -1.28 | Destabilizing | 0.63 | D | 0.719 | prob.delet. | N | 0.447509712 | None | None | N |
L/W | 0.9099 | likely_pathogenic | 0.9112 | pathogenic | -1.739 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/Y | 0.9398 | likely_pathogenic | 0.9359 | pathogenic | -1.418 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.