Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27378 | 82357;82358;82359 | chr2:178564000;178563999;178563998 | chr2:179428727;179428726;179428725 |
N2AB | 25737 | 77434;77435;77436 | chr2:178564000;178563999;178563998 | chr2:179428727;179428726;179428725 |
N2A | 24810 | 74653;74654;74655 | chr2:178564000;178563999;178563998 | chr2:179428727;179428726;179428725 |
N2B | 18313 | 55162;55163;55164 | chr2:178564000;178563999;178563998 | chr2:179428727;179428726;179428725 |
Novex-1 | 18438 | 55537;55538;55539 | chr2:178564000;178563999;178563998 | chr2:179428727;179428726;179428725 |
Novex-2 | 18505 | 55738;55739;55740 | chr2:178564000;178563999;178563998 | chr2:179428727;179428726;179428725 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs886055240 | -0.315 | 0.549 | N | 0.504 | 0.089 | 0.280987212366 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/T | rs886055240 | -0.315 | 0.549 | N | 0.504 | 0.089 | 0.280987212366 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs886055240 | -0.315 | 0.549 | N | 0.504 | 0.089 | 0.280987212366 | gnomAD-4.0.0 | 4.33821E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08587E-06 | 0 | 1.60123E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1651 | likely_benign | 0.1826 | benign | -0.177 | Destabilizing | 0.4 | N | 0.499 | neutral | None | None | None | None | N |
K/C | 0.4093 | ambiguous | 0.4349 | ambiguous | -0.355 | Destabilizing | 0.992 | D | 0.643 | neutral | None | None | None | None | N |
K/D | 0.3298 | likely_benign | 0.3581 | ambiguous | 0.078 | Stabilizing | 0.447 | N | 0.508 | neutral | None | None | None | None | N |
K/E | 0.1005 | likely_benign | 0.1086 | benign | 0.137 | Stabilizing | 0.002 | N | 0.241 | neutral | N | 0.468380842 | None | None | N |
K/F | 0.4933 | ambiguous | 0.5352 | ambiguous | -0.095 | Destabilizing | 0.972 | D | 0.604 | neutral | None | None | None | None | N |
K/G | 0.3114 | likely_benign | 0.3471 | ambiguous | -0.465 | Destabilizing | 0.447 | N | 0.566 | neutral | None | None | None | None | N |
K/H | 0.1608 | likely_benign | 0.17 | benign | -0.759 | Destabilizing | 0.92 | D | 0.573 | neutral | None | None | None | None | N |
K/I | 0.1562 | likely_benign | 0.1679 | benign | 0.527 | Stabilizing | 0.896 | D | 0.611 | neutral | N | 0.513057126 | None | None | N |
K/L | 0.1598 | likely_benign | 0.1672 | benign | 0.527 | Stabilizing | 0.617 | D | 0.571 | neutral | None | None | None | None | N |
K/M | 0.1238 | likely_benign | 0.1254 | benign | 0.228 | Stabilizing | 0.992 | D | 0.563 | neutral | None | None | None | None | N |
K/N | 0.2044 | likely_benign | 0.2281 | benign | -0.095 | Destabilizing | 0.004 | N | 0.353 | neutral | N | 0.492508496 | None | None | N |
K/P | 0.7224 | likely_pathogenic | 0.736 | pathogenic | 0.323 | Stabilizing | 0.92 | D | 0.597 | neutral | None | None | None | None | N |
K/Q | 0.086 | likely_benign | 0.0897 | benign | -0.188 | Destabilizing | 0.379 | N | 0.525 | neutral | N | 0.45583562 | None | None | N |
K/R | 0.0767 | likely_benign | 0.0774 | benign | -0.331 | Destabilizing | 0.004 | N | 0.325 | neutral | N | 0.443002395 | None | None | N |
K/S | 0.2052 | likely_benign | 0.2283 | benign | -0.634 | Destabilizing | 0.447 | N | 0.504 | neutral | None | None | None | None | N |
K/T | 0.0881 | likely_benign | 0.0937 | benign | -0.396 | Destabilizing | 0.549 | D | 0.504 | neutral | N | 0.451563163 | None | None | N |
K/V | 0.1397 | likely_benign | 0.1478 | benign | 0.323 | Stabilizing | 0.85 | D | 0.6 | neutral | None | None | None | None | N |
K/W | 0.5402 | ambiguous | 0.5828 | pathogenic | -0.056 | Destabilizing | 0.992 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/Y | 0.3868 | ambiguous | 0.4147 | ambiguous | 0.26 | Stabilizing | 0.972 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.