Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27379 | 82360;82361;82362 | chr2:178563997;178563996;178563995 | chr2:179428724;179428723;179428722 |
N2AB | 25738 | 77437;77438;77439 | chr2:178563997;178563996;178563995 | chr2:179428724;179428723;179428722 |
N2A | 24811 | 74656;74657;74658 | chr2:178563997;178563996;178563995 | chr2:179428724;179428723;179428722 |
N2B | 18314 | 55165;55166;55167 | chr2:178563997;178563996;178563995 | chr2:179428724;179428723;179428722 |
Novex-1 | 18439 | 55540;55541;55542 | chr2:178563997;178563996;178563995 | chr2:179428724;179428723;179428722 |
Novex-2 | 18506 | 55741;55742;55743 | chr2:178563997;178563996;178563995 | chr2:179428724;179428723;179428722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.898 | N | 0.481 | 0.23 | 0.379193981924 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.473 | ambiguous | 0.4433 | ambiguous | -1.48 | Destabilizing | 0.977 | D | 0.557 | neutral | D | 0.523695407 | None | None | N |
V/C | 0.8203 | likely_pathogenic | 0.8246 | pathogenic | -1.178 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/D | 0.9242 | likely_pathogenic | 0.907 | pathogenic | -0.838 | Destabilizing | 0.999 | D | 0.874 | deleterious | D | 0.524816766 | None | None | N |
V/E | 0.8617 | likely_pathogenic | 0.8417 | pathogenic | -0.758 | Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
V/F | 0.3549 | ambiguous | 0.3524 | ambiguous | -0.944 | Destabilizing | 0.993 | D | 0.846 | deleterious | N | 0.489257547 | None | None | N |
V/G | 0.642 | likely_pathogenic | 0.5931 | pathogenic | -1.887 | Destabilizing | 0.999 | D | 0.867 | deleterious | N | 0.508825651 | None | None | N |
V/H | 0.9424 | likely_pathogenic | 0.9395 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/I | 0.0743 | likely_benign | 0.077 | benign | -0.438 | Destabilizing | 0.117 | N | 0.303 | neutral | N | 0.469941067 | None | None | N |
V/K | 0.9095 | likely_pathogenic | 0.905 | pathogenic | -1.154 | Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
V/L | 0.3645 | ambiguous | 0.3664 | ambiguous | -0.438 | Destabilizing | 0.898 | D | 0.481 | neutral | N | 0.518868378 | None | None | N |
V/M | 0.3012 | likely_benign | 0.3028 | benign | -0.472 | Destabilizing | 0.995 | D | 0.778 | deleterious | None | None | None | None | N |
V/N | 0.8189 | likely_pathogenic | 0.7997 | pathogenic | -1.089 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.7243 | likely_pathogenic | 0.7051 | pathogenic | -0.75 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
V/Q | 0.8774 | likely_pathogenic | 0.8687 | pathogenic | -1.086 | Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
V/R | 0.8894 | likely_pathogenic | 0.8789 | pathogenic | -0.858 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
V/S | 0.7112 | likely_pathogenic | 0.6776 | pathogenic | -1.778 | Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
V/T | 0.5947 | likely_pathogenic | 0.5703 | pathogenic | -1.553 | Destabilizing | 0.983 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/W | 0.9434 | likely_pathogenic | 0.9473 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/Y | 0.8033 | likely_pathogenic | 0.7897 | pathogenic | -0.842 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.