Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27392 | 82399;82400;82401 | chr2:178563958;178563957;178563956 | chr2:179428685;179428684;179428683 |
N2AB | 25751 | 77476;77477;77478 | chr2:178563958;178563957;178563956 | chr2:179428685;179428684;179428683 |
N2A | 24824 | 74695;74696;74697 | chr2:178563958;178563957;178563956 | chr2:179428685;179428684;179428683 |
N2B | 18327 | 55204;55205;55206 | chr2:178563958;178563957;178563956 | chr2:179428685;179428684;179428683 |
Novex-1 | 18452 | 55579;55580;55581 | chr2:178563958;178563957;178563956 | chr2:179428685;179428684;179428683 |
Novex-2 | 18519 | 55780;55781;55782 | chr2:178563958;178563957;178563956 | chr2:179428685;179428684;179428683 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.627 | N | 0.641 | 0.157 | 0.430808444494 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85863E-06 | 0 | 0 |
N/K | rs1421975284 | -0.023 | 0.193 | N | 0.384 | 0.131 | 0.132336055621 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.43501E-04 | None | 0 | None | 0 | 0 | 0 |
N/K | rs1421975284 | -0.023 | 0.193 | N | 0.384 | 0.131 | 0.132336055621 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93424E-04 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs1421975284 | -0.023 | 0.193 | N | 0.384 | 0.131 | 0.132336055621 | gnomAD-4.0.0 | 6.57505E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93424E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1173 | likely_benign | 0.1369 | benign | -0.745 | Destabilizing | 0.002 | N | 0.377 | neutral | None | None | None | None | N |
N/C | 0.1612 | likely_benign | 0.1774 | benign | 0.065 | Stabilizing | 0.944 | D | 0.616 | neutral | None | None | None | None | N |
N/D | 0.137 | likely_benign | 0.1555 | benign | -0.353 | Destabilizing | 0.324 | N | 0.396 | neutral | N | 0.454448753 | None | None | N |
N/E | 0.1877 | likely_benign | 0.2157 | benign | -0.27 | Destabilizing | 0.241 | N | 0.395 | neutral | None | None | None | None | N |
N/F | 0.2725 | likely_benign | 0.3274 | benign | -0.575 | Destabilizing | 0.818 | D | 0.628 | neutral | None | None | None | None | N |
N/G | 0.1502 | likely_benign | 0.176 | benign | -1.068 | Destabilizing | 0.002 | N | 0.186 | neutral | None | None | None | None | N |
N/H | 0.0784 | likely_benign | 0.0921 | benign | -0.857 | Destabilizing | 0.003 | N | 0.271 | neutral | D | 0.522540614 | None | None | N |
N/I | 0.1193 | likely_benign | 0.1356 | benign | 0.068 | Stabilizing | 0.627 | D | 0.641 | neutral | N | 0.489236117 | None | None | N |
N/K | 0.1175 | likely_benign | 0.1478 | benign | -0.286 | Destabilizing | 0.193 | N | 0.384 | neutral | N | 0.396843244 | None | None | N |
N/L | 0.1007 | likely_benign | 0.1174 | benign | 0.068 | Stabilizing | 0.388 | N | 0.597 | neutral | None | None | None | None | N |
N/M | 0.1612 | likely_benign | 0.1835 | benign | 0.355 | Stabilizing | 0.981 | D | 0.617 | neutral | None | None | None | None | N |
N/P | 0.7086 | likely_pathogenic | 0.7488 | pathogenic | -0.173 | Destabilizing | 0.818 | D | 0.644 | neutral | None | None | None | None | N |
N/Q | 0.146 | likely_benign | 0.1756 | benign | -0.748 | Destabilizing | 0.69 | D | 0.514 | neutral | None | None | None | None | N |
N/R | 0.1623 | likely_benign | 0.2026 | benign | -0.339 | Destabilizing | 0.69 | D | 0.493 | neutral | None | None | None | None | N |
N/S | 0.0741 | likely_benign | 0.0836 | benign | -0.782 | Destabilizing | 0.001 | N | 0.174 | neutral | N | 0.394533658 | None | None | N |
N/T | 0.0929 | likely_benign | 0.1062 | benign | -0.512 | Destabilizing | 0.193 | N | 0.391 | neutral | N | 0.438420508 | None | None | N |
N/V | 0.1335 | likely_benign | 0.152 | benign | -0.173 | Destabilizing | 0.527 | D | 0.619 | neutral | None | None | None | None | N |
N/W | 0.5473 | ambiguous | 0.5989 | pathogenic | -0.41 | Destabilizing | 0.981 | D | 0.661 | neutral | None | None | None | None | N |
N/Y | 0.0969 | likely_benign | 0.1055 | benign | -0.196 | Destabilizing | 0.457 | N | 0.649 | neutral | N | 0.499010394 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.