Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27400 | 82423;82424;82425 | chr2:178563934;178563933;178563932 | chr2:179428661;179428660;179428659 |
N2AB | 25759 | 77500;77501;77502 | chr2:178563934;178563933;178563932 | chr2:179428661;179428660;179428659 |
N2A | 24832 | 74719;74720;74721 | chr2:178563934;178563933;178563932 | chr2:179428661;179428660;179428659 |
N2B | 18335 | 55228;55229;55230 | chr2:178563934;178563933;178563932 | chr2:179428661;179428660;179428659 |
Novex-1 | 18460 | 55603;55604;55605 | chr2:178563934;178563933;178563932 | chr2:179428661;179428660;179428659 |
Novex-2 | 18527 | 55804;55805;55806 | chr2:178563934;178563933;178563932 | chr2:179428661;179428660;179428659 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.955 | N | 0.704 | 0.323 | 0.31291088546 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4317 | ambiguous | 0.4175 | ambiguous | -0.83 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
A/D | 0.4139 | ambiguous | 0.404 | ambiguous | -1.038 | Destabilizing | 0.993 | D | 0.828 | deleterious | N | 0.509264673 | None | None | N |
A/E | 0.5113 | ambiguous | 0.5164 | ambiguous | -1.118 | Destabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | N |
A/F | 0.6027 | likely_pathogenic | 0.6168 | pathogenic | -1.227 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
A/G | 0.1788 | likely_benign | 0.1739 | benign | -1.113 | Destabilizing | 0.955 | D | 0.633 | neutral | N | 0.503333204 | None | None | N |
A/H | 0.6869 | likely_pathogenic | 0.6979 | pathogenic | -1.247 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
A/I | 0.6224 | likely_pathogenic | 0.6513 | pathogenic | -0.54 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
A/K | 0.8198 | likely_pathogenic | 0.8316 | pathogenic | -1.084 | Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
A/L | 0.4558 | ambiguous | 0.4397 | ambiguous | -0.54 | Destabilizing | 0.983 | D | 0.768 | deleterious | None | None | None | None | N |
A/M | 0.4204 | ambiguous | 0.4274 | ambiguous | -0.351 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
A/N | 0.3747 | ambiguous | 0.3941 | ambiguous | -0.701 | Destabilizing | 0.995 | D | 0.821 | deleterious | None | None | None | None | N |
A/P | 0.9738 | likely_pathogenic | 0.972 | pathogenic | -0.625 | Destabilizing | 0.997 | D | 0.821 | deleterious | N | 0.499970425 | None | None | N |
A/Q | 0.5831 | likely_pathogenic | 0.5897 | pathogenic | -0.939 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
A/R | 0.7627 | likely_pathogenic | 0.7743 | pathogenic | -0.665 | Destabilizing | 0.995 | D | 0.817 | deleterious | None | None | None | None | N |
A/S | 0.0796 | likely_benign | 0.077 | benign | -1.019 | Destabilizing | 0.568 | D | 0.529 | neutral | N | 0.406348162 | None | None | N |
A/T | 0.1502 | likely_benign | 0.1569 | benign | -1.012 | Destabilizing | 0.955 | D | 0.704 | prob.neutral | N | 0.513017054 | None | None | N |
A/V | 0.3083 | likely_benign | 0.3336 | benign | -0.625 | Destabilizing | 0.977 | D | 0.747 | deleterious | N | 0.478699392 | None | None | N |
A/W | 0.9006 | likely_pathogenic | 0.8977 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/Y | 0.6925 | likely_pathogenic | 0.6872 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.