Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27401 | 82426;82427;82428 | chr2:178563931;178563930;178563929 | chr2:179428658;179428657;179428656 |
N2AB | 25760 | 77503;77504;77505 | chr2:178563931;178563930;178563929 | chr2:179428658;179428657;179428656 |
N2A | 24833 | 74722;74723;74724 | chr2:178563931;178563930;178563929 | chr2:179428658;179428657;179428656 |
N2B | 18336 | 55231;55232;55233 | chr2:178563931;178563930;178563929 | chr2:179428658;179428657;179428656 |
Novex-1 | 18461 | 55606;55607;55608 | chr2:178563931;178563930;178563929 | chr2:179428658;179428657;179428656 |
Novex-2 | 18528 | 55807;55808;55809 | chr2:178563931;178563930;178563929 | chr2:179428658;179428657;179428656 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1365991014 | 0.394 | None | N | 0.079 | 0.112 | 0.104622674875 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65837E-04 |
N/D | rs1365991014 | 0.394 | None | N | 0.079 | 0.112 | 0.104622674875 | gnomAD-4.0.0 | 3.18284E-06 | None | None | None | None | I | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 2.85866E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0788 | likely_benign | 0.0924 | benign | -0.181 | Destabilizing | 0.007 | N | 0.448 | neutral | None | None | None | None | I |
N/C | 0.139 | likely_benign | 0.1652 | benign | 0.369 | Stabilizing | 0.676 | D | 0.503 | neutral | None | None | None | None | I |
N/D | 0.0857 | likely_benign | 0.0953 | benign | 0.181 | Stabilizing | None | N | 0.079 | neutral | N | 0.416757156 | None | None | I |
N/E | 0.1776 | likely_benign | 0.1984 | benign | 0.126 | Stabilizing | 0.016 | N | 0.369 | neutral | None | None | None | None | I |
N/F | 0.2974 | likely_benign | 0.3511 | ambiguous | -0.695 | Destabilizing | 0.356 | N | 0.533 | neutral | None | None | None | None | I |
N/G | 0.1167 | likely_benign | 0.1361 | benign | -0.307 | Destabilizing | 0.007 | N | 0.285 | neutral | None | None | None | None | I |
N/H | 0.0883 | likely_benign | 0.0994 | benign | -0.37 | Destabilizing | 0.295 | N | 0.407 | neutral | N | 0.466359257 | None | None | I |
N/I | 0.1101 | likely_benign | 0.1237 | benign | 0.056 | Stabilizing | 0.171 | N | 0.521 | neutral | N | 0.469764922 | None | None | I |
N/K | 0.1451 | likely_benign | 0.1628 | benign | 0.205 | Stabilizing | 0.012 | N | 0.366 | neutral | N | 0.372312946 | None | None | I |
N/L | 0.1204 | likely_benign | 0.131 | benign | 0.056 | Stabilizing | 0.072 | N | 0.561 | neutral | None | None | None | None | I |
N/M | 0.1814 | likely_benign | 0.2042 | benign | 0.305 | Stabilizing | 0.628 | D | 0.502 | neutral | None | None | None | None | I |
N/P | 0.1461 | likely_benign | 0.1592 | benign | 0.002 | Stabilizing | 0.072 | N | 0.513 | neutral | None | None | None | None | I |
N/Q | 0.1694 | likely_benign | 0.1958 | benign | -0.164 | Destabilizing | 0.072 | N | 0.382 | neutral | None | None | None | None | I |
N/R | 0.1788 | likely_benign | 0.2122 | benign | 0.256 | Stabilizing | 0.072 | N | 0.383 | neutral | None | None | None | None | I |
N/S | 0.0539 | likely_benign | 0.0583 | benign | 0.063 | Stabilizing | None | N | 0.075 | neutral | N | 0.428147586 | None | None | I |
N/T | 0.0686 | likely_benign | 0.0757 | benign | 0.135 | Stabilizing | 0.012 | N | 0.372 | neutral | N | 0.448253499 | None | None | I |
N/V | 0.0998 | likely_benign | 0.1104 | benign | 0.002 | Stabilizing | 0.072 | N | 0.533 | neutral | None | None | None | None | I |
N/W | 0.5664 | likely_pathogenic | 0.6395 | pathogenic | -0.76 | Destabilizing | 0.864 | D | 0.547 | neutral | None | None | None | None | I |
N/Y | 0.1313 | likely_benign | 0.1429 | benign | -0.455 | Destabilizing | 0.295 | N | 0.521 | neutral | N | 0.507109802 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.