Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27409 | 82450;82451;82452 | chr2:178563907;178563906;178563905 | chr2:179428634;179428633;179428632 |
N2AB | 25768 | 77527;77528;77529 | chr2:178563907;178563906;178563905 | chr2:179428634;179428633;179428632 |
N2A | 24841 | 74746;74747;74748 | chr2:178563907;178563906;178563905 | chr2:179428634;179428633;179428632 |
N2B | 18344 | 55255;55256;55257 | chr2:178563907;178563906;178563905 | chr2:179428634;179428633;179428632 |
Novex-1 | 18469 | 55630;55631;55632 | chr2:178563907;178563906;178563905 | chr2:179428634;179428633;179428632 |
Novex-2 | 18536 | 55831;55832;55833 | chr2:178563907;178563906;178563905 | chr2:179428634;179428633;179428632 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.958 | N | 0.681 | 0.473 | 0.327952845175 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
K/N | rs1372169120 | -2.179 | 0.988 | N | 0.806 | 0.43 | 0.294561560033 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1372169120 | -2.179 | 0.988 | N | 0.806 | 0.43 | 0.294561560033 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9856 | likely_pathogenic | 0.9862 | pathogenic | -1.584 | Destabilizing | 0.968 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/C | 0.9609 | likely_pathogenic | 0.9607 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
K/D | 0.9978 | likely_pathogenic | 0.9978 | pathogenic | -2.19 | Highly Destabilizing | 0.995 | D | 0.821 | deleterious | None | None | None | None | N |
K/E | 0.9707 | likely_pathogenic | 0.9722 | pathogenic | -1.847 | Destabilizing | 0.958 | D | 0.681 | prob.neutral | N | 0.500348819 | None | None | N |
K/F | 0.9941 | likely_pathogenic | 0.9952 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
K/G | 0.9855 | likely_pathogenic | 0.9859 | pathogenic | -2.094 | Highly Destabilizing | 0.991 | D | 0.773 | deleterious | None | None | None | None | N |
K/H | 0.8872 | likely_pathogenic | 0.8933 | pathogenic | -1.768 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
K/I | 0.9695 | likely_pathogenic | 0.9707 | pathogenic | -0.11 | Destabilizing | 0.995 | D | 0.855 | deleterious | None | None | None | None | N |
K/L | 0.9458 | likely_pathogenic | 0.9436 | pathogenic | -0.11 | Destabilizing | 0.991 | D | 0.773 | deleterious | None | None | None | None | N |
K/M | 0.8725 | likely_pathogenic | 0.8768 | pathogenic | -0.476 | Destabilizing | 0.999 | D | 0.824 | deleterious | D | 0.523175332 | None | None | N |
K/N | 0.9903 | likely_pathogenic | 0.9902 | pathogenic | -2.024 | Highly Destabilizing | 0.988 | D | 0.806 | deleterious | N | 0.500348819 | None | None | N |
K/P | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -0.584 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
K/Q | 0.751 | likely_pathogenic | 0.7694 | pathogenic | -1.585 | Destabilizing | 0.988 | D | 0.807 | deleterious | N | 0.482244564 | None | None | N |
K/R | 0.1404 | likely_benign | 0.1499 | benign | -0.912 | Destabilizing | 0.142 | N | 0.38 | neutral | N | 0.439423372 | None | None | N |
K/S | 0.9895 | likely_pathogenic | 0.9905 | pathogenic | -2.558 | Highly Destabilizing | 0.968 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/T | 0.9653 | likely_pathogenic | 0.9653 | pathogenic | -1.936 | Destabilizing | 0.988 | D | 0.785 | deleterious | N | 0.471760405 | None | None | N |
K/V | 0.958 | likely_pathogenic | 0.9591 | pathogenic | -0.584 | Destabilizing | 0.995 | D | 0.816 | deleterious | None | None | None | None | N |
K/W | 0.9845 | likely_pathogenic | 0.9881 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
K/Y | 0.9637 | likely_pathogenic | 0.9716 | pathogenic | -0.492 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.