Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27410 | 82453;82454;82455 | chr2:178563904;178563903;178563902 | chr2:179428631;179428630;179428629 |
N2AB | 25769 | 77530;77531;77532 | chr2:178563904;178563903;178563902 | chr2:179428631;179428630;179428629 |
N2A | 24842 | 74749;74750;74751 | chr2:178563904;178563903;178563902 | chr2:179428631;179428630;179428629 |
N2B | 18345 | 55258;55259;55260 | chr2:178563904;178563903;178563902 | chr2:179428631;179428630;179428629 |
Novex-1 | 18470 | 55633;55634;55635 | chr2:178563904;178563903;178563902 | chr2:179428631;179428630;179428629 |
Novex-2 | 18537 | 55834;55835;55836 | chr2:178563904;178563903;178563902 | chr2:179428631;179428630;179428629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.025 | N | 0.198 | 0.212 | 0.229924730088 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9851 | likely_pathogenic | 0.9816 | pathogenic | -2.312 | Highly Destabilizing | 0.845 | D | 0.532 | neutral | None | None | None | None | N |
R/C | 0.6837 | likely_pathogenic | 0.6636 | pathogenic | -2.056 | Highly Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
R/D | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -0.902 | Destabilizing | 0.975 | D | 0.754 | deleterious | None | None | None | None | N |
R/E | 0.9755 | likely_pathogenic | 0.9687 | pathogenic | -0.693 | Destabilizing | 0.845 | D | 0.451 | neutral | None | None | None | None | N |
R/F | 0.9956 | likely_pathogenic | 0.9941 | pathogenic | -1.581 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
R/G | 0.9696 | likely_pathogenic | 0.9628 | pathogenic | -2.634 | Highly Destabilizing | 0.892 | D | 0.662 | neutral | N | 0.502389962 | None | None | N |
R/H | 0.8131 | likely_pathogenic | 0.7821 | pathogenic | -2.403 | Highly Destabilizing | 0.987 | D | 0.611 | neutral | None | None | None | None | N |
R/I | 0.9847 | likely_pathogenic | 0.9809 | pathogenic | -1.37 | Destabilizing | 0.987 | D | 0.819 | deleterious | None | None | None | None | N |
R/K | 0.5222 | ambiguous | 0.4919 | ambiguous | -1.402 | Destabilizing | 0.025 | N | 0.198 | neutral | N | 0.497066167 | None | None | N |
R/L | 0.9604 | likely_pathogenic | 0.9557 | pathogenic | -1.37 | Destabilizing | 0.916 | D | 0.662 | neutral | None | None | None | None | N |
R/M | 0.9556 | likely_pathogenic | 0.9475 | pathogenic | -1.814 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.480273236 | None | None | N |
R/N | 0.9947 | likely_pathogenic | 0.9935 | pathogenic | -1.267 | Destabilizing | 0.975 | D | 0.569 | neutral | None | None | None | None | N |
R/P | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.676 | Destabilizing | 0.987 | D | 0.778 | deleterious | None | None | None | None | N |
R/Q | 0.5855 | likely_pathogenic | 0.5348 | ambiguous | -1.226 | Destabilizing | 0.975 | D | 0.554 | neutral | None | None | None | None | N |
R/S | 0.9949 | likely_pathogenic | 0.993 | pathogenic | -2.284 | Highly Destabilizing | 0.892 | D | 0.617 | neutral | N | 0.482395922 | None | None | N |
R/T | 0.9872 | likely_pathogenic | 0.9844 | pathogenic | -1.869 | Destabilizing | 0.967 | D | 0.701 | prob.neutral | N | 0.496287122 | None | None | N |
R/V | 0.9827 | likely_pathogenic | 0.9787 | pathogenic | -1.676 | Destabilizing | 0.975 | D | 0.797 | deleterious | None | None | None | None | N |
R/W | 0.9334 | likely_pathogenic | 0.9192 | pathogenic | -1.006 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | N | 0.498248905 | None | None | N |
R/Y | 0.9774 | likely_pathogenic | 0.974 | pathogenic | -0.918 | Destabilizing | 0.996 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.