Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27422 | 82489;82490;82491 | chr2:178563868;178563867;178563866 | chr2:179428595;179428594;179428593 |
N2AB | 25781 | 77566;77567;77568 | chr2:178563868;178563867;178563866 | chr2:179428595;179428594;179428593 |
N2A | 24854 | 74785;74786;74787 | chr2:178563868;178563867;178563866 | chr2:179428595;179428594;179428593 |
N2B | 18357 | 55294;55295;55296 | chr2:178563868;178563867;178563866 | chr2:179428595;179428594;179428593 |
Novex-1 | 18482 | 55669;55670;55671 | chr2:178563868;178563867;178563866 | chr2:179428595;179428594;179428593 |
Novex-2 | 18549 | 55870;55871;55872 | chr2:178563868;178563867;178563866 | chr2:179428595;179428594;179428593 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs760304866 | -0.486 | None | N | 0.083 | 0.075 | 0.17258766438 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/A | rs760304866 | -0.486 | None | N | 0.083 | 0.075 | 0.17258766438 | gnomAD-4.0.0 | 1.75048E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.14426E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0593 | likely_benign | 0.0614 | benign | -0.62 | Destabilizing | None | N | 0.083 | neutral | N | 0.413698209 | None | None | N |
T/C | 0.2967 | likely_benign | 0.3047 | benign | -0.363 | Destabilizing | 0.676 | D | 0.352 | neutral | None | None | None | None | N |
T/D | 0.2702 | likely_benign | 0.2904 | benign | -0.024 | Destabilizing | 0.038 | N | 0.316 | neutral | None | None | None | None | N |
T/E | 0.2216 | likely_benign | 0.2346 | benign | -0.059 | Destabilizing | 0.038 | N | 0.302 | neutral | None | None | None | None | N |
T/F | 0.2301 | likely_benign | 0.2468 | benign | -0.812 | Destabilizing | 0.356 | N | 0.363 | neutral | None | None | None | None | N |
T/G | 0.129 | likely_benign | 0.1273 | benign | -0.836 | Destabilizing | 0.016 | N | 0.268 | neutral | None | None | None | None | N |
T/H | 0.2028 | likely_benign | 0.2082 | benign | -1.096 | Destabilizing | 0.214 | N | 0.335 | neutral | None | None | None | None | N |
T/I | 0.1697 | likely_benign | 0.1759 | benign | -0.152 | Destabilizing | 0.171 | N | 0.406 | neutral | N | 0.492908354 | None | None | N |
T/K | 0.1602 | likely_benign | 0.1729 | benign | -0.628 | Destabilizing | 0.038 | N | 0.316 | neutral | None | None | None | None | N |
T/L | 0.0835 | likely_benign | 0.0876 | benign | -0.152 | Destabilizing | 0.072 | N | 0.295 | neutral | None | None | None | None | N |
T/M | 0.0862 | likely_benign | 0.0906 | benign | 0.084 | Stabilizing | 0.628 | D | 0.361 | neutral | None | None | None | None | N |
T/N | 0.095 | likely_benign | 0.0928 | benign | -0.443 | Destabilizing | None | N | 0.158 | neutral | N | 0.460260004 | None | None | N |
T/P | 0.0763 | likely_benign | 0.0803 | benign | -0.276 | Destabilizing | None | N | 0.193 | neutral | N | 0.42709158 | None | None | N |
T/Q | 0.1847 | likely_benign | 0.1897 | benign | -0.647 | Destabilizing | 0.214 | N | 0.413 | neutral | None | None | None | None | N |
T/R | 0.147 | likely_benign | 0.1612 | benign | -0.338 | Destabilizing | 0.214 | N | 0.403 | neutral | None | None | None | None | N |
T/S | 0.076 | likely_benign | 0.0753 | benign | -0.707 | Destabilizing | None | N | 0.095 | neutral | N | 0.377913554 | None | None | N |
T/V | 0.1191 | likely_benign | 0.1219 | benign | -0.276 | Destabilizing | 0.072 | N | 0.198 | neutral | None | None | None | None | N |
T/W | 0.5143 | ambiguous | 0.5664 | pathogenic | -0.758 | Destabilizing | 0.864 | D | 0.428 | neutral | None | None | None | None | N |
T/Y | 0.24 | likely_benign | 0.2674 | benign | -0.526 | Destabilizing | 0.356 | N | 0.362 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.