Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27423 | 82492;82493;82494 | chr2:178563865;178563864;178563863 | chr2:179428592;179428591;179428590 |
N2AB | 25782 | 77569;77570;77571 | chr2:178563865;178563864;178563863 | chr2:179428592;179428591;179428590 |
N2A | 24855 | 74788;74789;74790 | chr2:178563865;178563864;178563863 | chr2:179428592;179428591;179428590 |
N2B | 18358 | 55297;55298;55299 | chr2:178563865;178563864;178563863 | chr2:179428592;179428591;179428590 |
Novex-1 | 18483 | 55672;55673;55674 | chr2:178563865;178563864;178563863 | chr2:179428592;179428591;179428590 |
Novex-2 | 18550 | 55873;55874;55875 | chr2:178563865;178563864;178563863 | chr2:179428592;179428591;179428590 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs775004192 | -0.374 | 0.002 | N | 0.109 | 0.102 | 0.107399877778 | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.5938E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs775004192 | -0.374 | 0.002 | N | 0.109 | 0.102 | 0.107399877778 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93349E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1486346584 | 0.41 | 0.007 | N | 0.113 | 0.146 | 0.168933306366 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/K | rs1486346584 | 0.41 | 0.007 | N | 0.113 | 0.146 | 0.168933306366 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs1486346584 | 0.41 | 0.007 | N | 0.113 | 0.146 | 0.168933306366 | gnomAD-4.0.0 | 1.85915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54288E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1173 | likely_benign | 0.1225 | benign | -0.504 | Destabilizing | 0.334 | N | 0.325 | neutral | N | 0.473093229 | None | None | N |
E/C | 0.7416 | likely_pathogenic | 0.7403 | pathogenic | -0.178 | Destabilizing | 0.992 | D | 0.279 | neutral | None | None | None | None | N |
E/D | 0.0937 | likely_benign | 0.0903 | benign | -0.42 | Destabilizing | 0.002 | N | 0.109 | neutral | N | 0.429763739 | None | None | N |
E/F | 0.686 | likely_pathogenic | 0.6752 | pathogenic | -0.303 | Destabilizing | 0.972 | D | 0.277 | neutral | None | None | None | None | N |
E/G | 0.1383 | likely_benign | 0.1402 | benign | -0.737 | Destabilizing | 0.379 | N | 0.337 | neutral | N | 0.462222874 | None | None | N |
E/H | 0.3399 | likely_benign | 0.3402 | ambiguous | -0.195 | Destabilizing | 0.92 | D | 0.345 | neutral | None | None | None | None | N |
E/I | 0.3543 | ambiguous | 0.3494 | ambiguous | 0.088 | Stabilizing | 0.92 | D | 0.315 | neutral | None | None | None | None | N |
E/K | 0.1329 | likely_benign | 0.142 | benign | 0.009 | Stabilizing | 0.007 | N | 0.113 | neutral | N | 0.424280562 | None | None | N |
E/L | 0.3875 | ambiguous | 0.3941 | ambiguous | 0.088 | Stabilizing | 0.617 | D | 0.347 | neutral | None | None | None | None | N |
E/M | 0.3957 | ambiguous | 0.4037 | ambiguous | 0.221 | Stabilizing | 0.992 | D | 0.259 | neutral | None | None | None | None | N |
E/N | 0.1508 | likely_benign | 0.1529 | benign | -0.255 | Destabilizing | 0.005 | N | 0.219 | neutral | None | None | None | None | N |
E/P | 0.7125 | likely_pathogenic | 0.6906 | pathogenic | -0.089 | Destabilizing | 0.92 | D | 0.375 | neutral | None | None | None | None | N |
E/Q | 0.1314 | likely_benign | 0.1374 | benign | -0.206 | Destabilizing | 0.549 | D | 0.291 | neutral | N | 0.484465016 | None | None | N |
E/R | 0.2268 | likely_benign | 0.2374 | benign | 0.267 | Stabilizing | 0.005 | N | 0.195 | neutral | None | None | None | None | N |
E/S | 0.1453 | likely_benign | 0.1447 | benign | -0.47 | Destabilizing | 0.25 | N | 0.273 | neutral | None | None | None | None | N |
E/T | 0.1652 | likely_benign | 0.1653 | benign | -0.287 | Destabilizing | 0.617 | D | 0.34 | neutral | None | None | None | None | N |
E/V | 0.2013 | likely_benign | 0.1979 | benign | -0.089 | Destabilizing | 0.712 | D | 0.336 | neutral | N | 0.457374415 | None | None | N |
E/W | 0.866 | likely_pathogenic | 0.8588 | pathogenic | -0.134 | Destabilizing | 0.992 | D | 0.409 | neutral | None | None | None | None | N |
E/Y | 0.5199 | ambiguous | 0.5186 | ambiguous | -0.07 | Destabilizing | 0.972 | D | 0.283 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.