Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27425 | 82498;82499;82500 | chr2:178563859;178563858;178563857 | chr2:179428586;179428585;179428584 |
N2AB | 25784 | 77575;77576;77577 | chr2:178563859;178563858;178563857 | chr2:179428586;179428585;179428584 |
N2A | 24857 | 74794;74795;74796 | chr2:178563859;178563858;178563857 | chr2:179428586;179428585;179428584 |
N2B | 18360 | 55303;55304;55305 | chr2:178563859;178563858;178563857 | chr2:179428586;179428585;179428584 |
Novex-1 | 18485 | 55678;55679;55680 | chr2:178563859;178563858;178563857 | chr2:179428586;179428585;179428584 |
Novex-2 | 18552 | 55879;55880;55881 | chr2:178563859;178563858;178563857 | chr2:179428586;179428585;179428584 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1302788050 | 0.387 | 0.211 | N | 0.459 | 0.17 | 0.130388298395 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/R | rs1302788050 | 0.387 | 0.211 | N | 0.459 | 0.17 | 0.130388298395 | gnomAD-4.0.0 | 6.36547E-06 | None | None | None | None | N | None | 0 | 9.14578E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.146 | likely_benign | 0.1582 | benign | -0.111 | Destabilizing | 0.035 | N | 0.411 | neutral | None | None | None | None | N |
Q/C | 0.569 | likely_pathogenic | 0.6148 | pathogenic | 0.026 | Stabilizing | 0.935 | D | 0.416 | neutral | None | None | None | None | N |
Q/D | 0.3303 | likely_benign | 0.3598 | ambiguous | 0.038 | Stabilizing | 0.149 | N | 0.445 | neutral | None | None | None | None | N |
Q/E | 0.0796 | likely_benign | 0.0825 | benign | 0.011 | Stabilizing | 0.052 | N | 0.393 | neutral | N | 0.40962054 | None | None | N |
Q/F | 0.6124 | likely_pathogenic | 0.6481 | pathogenic | -0.338 | Destabilizing | 0.555 | D | 0.414 | neutral | None | None | None | None | N |
Q/G | 0.2223 | likely_benign | 0.2476 | benign | -0.285 | Destabilizing | 0.149 | N | 0.437 | neutral | None | None | None | None | N |
Q/H | 0.196 | likely_benign | 0.2156 | benign | -0.08 | Destabilizing | 0.741 | D | 0.445 | neutral | N | 0.470919715 | None | None | N |
Q/I | 0.3013 | likely_benign | 0.3115 | benign | 0.256 | Stabilizing | 0.081 | N | 0.397 | neutral | None | None | None | None | N |
Q/K | 0.0789 | likely_benign | 0.0827 | benign | 0.047 | Stabilizing | 0.117 | N | 0.438 | neutral | N | 0.392266931 | None | None | N |
Q/L | 0.1106 | likely_benign | 0.1174 | benign | 0.256 | Stabilizing | 0.062 | N | 0.415 | neutral | N | 0.501242622 | None | None | N |
Q/M | 0.2811 | likely_benign | 0.2791 | benign | 0.277 | Stabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | N |
Q/N | 0.2566 | likely_benign | 0.2733 | benign | -0.326 | Destabilizing | 0.555 | D | 0.435 | neutral | None | None | None | None | N |
Q/P | 0.0865 | likely_benign | 0.093 | benign | 0.161 | Stabilizing | None | N | 0.207 | neutral | N | 0.418066665 | None | None | N |
Q/R | 0.0967 | likely_benign | 0.1008 | benign | 0.222 | Stabilizing | 0.211 | N | 0.459 | neutral | N | 0.428361017 | None | None | N |
Q/S | 0.1968 | likely_benign | 0.2044 | benign | -0.296 | Destabilizing | 0.149 | N | 0.422 | neutral | None | None | None | None | N |
Q/T | 0.1437 | likely_benign | 0.1474 | benign | -0.172 | Destabilizing | 0.149 | N | 0.43 | neutral | None | None | None | None | N |
Q/V | 0.1817 | likely_benign | 0.1901 | benign | 0.161 | Stabilizing | 0.002 | N | 0.261 | neutral | None | None | None | None | N |
Q/W | 0.4813 | ambiguous | 0.542 | ambiguous | -0.359 | Destabilizing | 0.935 | D | 0.491 | neutral | None | None | None | None | N |
Q/Y | 0.4223 | ambiguous | 0.4582 | ambiguous | -0.084 | Destabilizing | 0.791 | D | 0.447 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.