Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27435 | 82528;82529;82530 | chr2:178563829;178563828;178563827 | chr2:179428556;179428555;179428554 |
N2AB | 25794 | 77605;77606;77607 | chr2:178563829;178563828;178563827 | chr2:179428556;179428555;179428554 |
N2A | 24867 | 74824;74825;74826 | chr2:178563829;178563828;178563827 | chr2:179428556;179428555;179428554 |
N2B | 18370 | 55333;55334;55335 | chr2:178563829;178563828;178563827 | chr2:179428556;179428555;179428554 |
Novex-1 | 18495 | 55708;55709;55710 | chr2:178563829;178563828;178563827 | chr2:179428556;179428555;179428554 |
Novex-2 | 18562 | 55909;55910;55911 | chr2:178563829;178563828;178563827 | chr2:179428556;179428555;179428554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1060500432 | None | 0.979 | N | 0.459 | 0.253 | 0.379193981924 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9109 | likely_pathogenic | 0.9102 | pathogenic | -1.469 | Destabilizing | 0.968 | D | 0.54 | neutral | None | None | None | None | N |
L/C | 0.9342 | likely_pathogenic | 0.9441 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
L/D | 0.9932 | likely_pathogenic | 0.9946 | pathogenic | -0.675 | Destabilizing | 0.995 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/E | 0.9614 | likely_pathogenic | 0.9682 | pathogenic | -0.672 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/F | 0.63 | likely_pathogenic | 0.6661 | pathogenic | -0.995 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | N | 0.489390833 | None | None | N |
L/G | 0.979 | likely_pathogenic | 0.98 | pathogenic | -1.786 | Destabilizing | 0.991 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/H | 0.8468 | likely_pathogenic | 0.8579 | pathogenic | -0.879 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | D | 0.523522049 | None | None | N |
L/I | 0.2182 | likely_benign | 0.2234 | benign | -0.678 | Destabilizing | 0.979 | D | 0.459 | neutral | N | 0.430150528 | None | None | N |
L/K | 0.8924 | likely_pathogenic | 0.9038 | pathogenic | -0.873 | Destabilizing | 0.982 | D | 0.613 | neutral | None | None | None | None | N |
L/M | 0.353 | ambiguous | 0.3742 | ambiguous | -0.521 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | N |
L/N | 0.9424 | likely_pathogenic | 0.944 | pathogenic | -0.69 | Destabilizing | 0.991 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/P | 0.977 | likely_pathogenic | 0.9724 | pathogenic | -0.91 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | N | 0.473775095 | None | None | N |
L/Q | 0.7787 | likely_pathogenic | 0.7998 | pathogenic | -0.847 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/R | 0.8161 | likely_pathogenic | 0.8319 | pathogenic | -0.289 | Destabilizing | 0.142 | N | 0.403 | neutral | N | 0.47970977 | None | None | N |
L/S | 0.9492 | likely_pathogenic | 0.9526 | pathogenic | -1.33 | Destabilizing | 0.991 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/T | 0.8813 | likely_pathogenic | 0.8972 | pathogenic | -1.203 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | N |
L/V | 0.402 | ambiguous | 0.4194 | ambiguous | -0.91 | Destabilizing | 0.979 | D | 0.445 | neutral | N | 0.454776827 | None | None | N |
L/W | 0.8303 | likely_pathogenic | 0.8374 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/Y | 0.875 | likely_pathogenic | 0.8819 | pathogenic | -0.819 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.