Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27436 | 82531;82532;82533 | chr2:178563826;178563825;178563824 | chr2:179428553;179428552;179428551 |
N2AB | 25795 | 77608;77609;77610 | chr2:178563826;178563825;178563824 | chr2:179428553;179428552;179428551 |
N2A | 24868 | 74827;74828;74829 | chr2:178563826;178563825;178563824 | chr2:179428553;179428552;179428551 |
N2B | 18371 | 55336;55337;55338 | chr2:178563826;178563825;178563824 | chr2:179428553;179428552;179428551 |
Novex-1 | 18496 | 55711;55712;55713 | chr2:178563826;178563825;178563824 | chr2:179428553;179428552;179428551 |
Novex-2 | 18563 | 55912;55913;55914 | chr2:178563826;178563825;178563824 | chr2:179428553;179428552;179428551 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.521 | D | 0.376 | 0.336 | 0.269558022972 | gnomAD-4.0.0 | 3.18268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.5497E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0675 | likely_benign | 0.0693 | benign | -0.828 | Destabilizing | 0.007 | N | 0.234 | neutral | N | 0.518127377 | None | None | N |
P/C | 0.3973 | ambiguous | 0.4362 | ambiguous | -0.589 | Destabilizing | 0.996 | D | 0.505 | neutral | None | None | None | None | N |
P/D | 0.5097 | ambiguous | 0.5295 | ambiguous | -0.683 | Destabilizing | 0.59 | D | 0.456 | neutral | None | None | None | None | N |
P/E | 0.2258 | likely_benign | 0.2357 | benign | -0.791 | Destabilizing | 0.082 | N | 0.251 | neutral | None | None | None | None | N |
P/F | 0.4911 | ambiguous | 0.5159 | ambiguous | -0.977 | Destabilizing | 0.953 | D | 0.507 | neutral | None | None | None | None | N |
P/G | 0.3002 | likely_benign | 0.305 | benign | -1.002 | Destabilizing | 0.009 | N | 0.245 | neutral | None | None | None | None | N |
P/H | 0.1865 | likely_benign | 0.1951 | benign | -0.524 | Destabilizing | 0.994 | D | 0.467 | neutral | N | 0.509903559 | None | None | N |
P/I | 0.2509 | likely_benign | 0.2746 | benign | -0.507 | Destabilizing | 0.91 | D | 0.51 | neutral | None | None | None | None | N |
P/K | 0.2129 | likely_benign | 0.2187 | benign | -0.66 | Destabilizing | 0.742 | D | 0.455 | neutral | None | None | None | None | N |
P/L | 0.1057 | likely_benign | 0.1114 | benign | -0.507 | Destabilizing | 0.521 | D | 0.506 | neutral | N | 0.495660418 | None | None | N |
P/M | 0.2424 | likely_benign | 0.2631 | benign | -0.326 | Destabilizing | 0.996 | D | 0.465 | neutral | None | None | None | None | N |
P/N | 0.3286 | likely_benign | 0.3524 | ambiguous | -0.337 | Destabilizing | 0.91 | D | 0.477 | neutral | None | None | None | None | N |
P/Q | 0.1276 | likely_benign | 0.1377 | benign | -0.634 | Destabilizing | 0.91 | D | 0.434 | neutral | None | None | None | None | N |
P/R | 0.1569 | likely_benign | 0.1583 | benign | -0.039 | Destabilizing | 0.884 | D | 0.473 | neutral | N | 0.496559017 | None | None | N |
P/S | 0.1299 | likely_benign | 0.1377 | benign | -0.718 | Destabilizing | 0.521 | D | 0.376 | neutral | D | 0.53377162 | None | None | N |
P/T | 0.0862 | likely_benign | 0.0947 | benign | -0.729 | Destabilizing | 0.028 | N | 0.255 | neutral | D | 0.53377162 | None | None | N |
P/V | 0.1607 | likely_benign | 0.1714 | benign | -0.578 | Destabilizing | 0.59 | D | 0.481 | neutral | None | None | None | None | N |
P/W | 0.6079 | likely_pathogenic | 0.627 | pathogenic | -1.047 | Destabilizing | 0.996 | D | 0.572 | neutral | None | None | None | None | N |
P/Y | 0.4179 | ambiguous | 0.4336 | ambiguous | -0.762 | Destabilizing | 0.984 | D | 0.511 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.