Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27437 | 82534;82535;82536 | chr2:178563823;178563822;178563821 | chr2:179428550;179428549;179428548 |
N2AB | 25796 | 77611;77612;77613 | chr2:178563823;178563822;178563821 | chr2:179428550;179428549;179428548 |
N2A | 24869 | 74830;74831;74832 | chr2:178563823;178563822;178563821 | chr2:179428550;179428549;179428548 |
N2B | 18372 | 55339;55340;55341 | chr2:178563823;178563822;178563821 | chr2:179428550;179428549;179428548 |
Novex-1 | 18497 | 55714;55715;55716 | chr2:178563823;178563822;178563821 | chr2:179428550;179428549;179428548 |
Novex-2 | 18564 | 55915;55916;55917 | chr2:178563823;178563822;178563821 | chr2:179428550;179428549;179428548 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1431238411 | -0.592 | 0.048 | N | 0.673 | 0.292 | 0.170165803431 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
G/S | rs1431238411 | -0.592 | 0.048 | N | 0.673 | 0.292 | 0.170165803431 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.456 | ambiguous | 0.4721 | ambiguous | -0.513 | Destabilizing | 0.775 | D | 0.625 | neutral | N | 0.48658402 | None | None | N |
G/C | 0.5094 | ambiguous | 0.5224 | ambiguous | -0.826 | Destabilizing | 0.995 | D | 0.865 | deleterious | D | 0.54802681 | None | None | N |
G/D | 0.3606 | ambiguous | 0.3905 | ambiguous | -1.102 | Destabilizing | 0.924 | D | 0.805 | deleterious | D | 0.529896235 | None | None | N |
G/E | 0.5032 | ambiguous | 0.5135 | ambiguous | -1.27 | Destabilizing | 0.941 | D | 0.872 | deleterious | None | None | None | None | N |
G/F | 0.8565 | likely_pathogenic | 0.8704 | pathogenic | -1.282 | Destabilizing | 0.996 | D | 0.881 | deleterious | None | None | None | None | N |
G/H | 0.5738 | likely_pathogenic | 0.607 | pathogenic | -0.823 | Destabilizing | 0.996 | D | 0.861 | deleterious | None | None | None | None | N |
G/I | 0.8964 | likely_pathogenic | 0.9065 | pathogenic | -0.601 | Destabilizing | 0.992 | D | 0.881 | deleterious | None | None | None | None | N |
G/K | 0.6507 | likely_pathogenic | 0.6566 | pathogenic | -1.036 | Destabilizing | 0.941 | D | 0.876 | deleterious | None | None | None | None | N |
G/L | 0.7945 | likely_pathogenic | 0.8139 | pathogenic | -0.601 | Destabilizing | 0.97 | D | 0.876 | deleterious | None | None | None | None | N |
G/M | 0.8209 | likely_pathogenic | 0.8295 | pathogenic | -0.372 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
G/N | 0.3048 | likely_benign | 0.3513 | ambiguous | -0.629 | Destabilizing | 0.941 | D | 0.826 | deleterious | None | None | None | None | N |
G/P | 0.9903 | likely_pathogenic | 0.9921 | pathogenic | -0.538 | Destabilizing | 0.97 | D | 0.893 | deleterious | None | None | None | None | N |
G/Q | 0.5263 | ambiguous | 0.5356 | ambiguous | -0.989 | Destabilizing | 0.992 | D | 0.893 | deleterious | None | None | None | None | N |
G/R | 0.531 | ambiguous | 0.5383 | ambiguous | -0.493 | Destabilizing | 0.96 | D | 0.896 | deleterious | N | 0.520261316 | None | None | N |
G/S | 0.2017 | likely_benign | 0.2266 | benign | -0.729 | Destabilizing | 0.048 | N | 0.673 | neutral | N | 0.489520082 | None | None | N |
G/T | 0.5405 | ambiguous | 0.5676 | pathogenic | -0.844 | Destabilizing | 0.941 | D | 0.865 | deleterious | None | None | None | None | N |
G/V | 0.8043 | likely_pathogenic | 0.8128 | pathogenic | -0.538 | Destabilizing | 0.96 | D | 0.885 | deleterious | N | 0.521021785 | None | None | N |
G/W | 0.7747 | likely_pathogenic | 0.7834 | pathogenic | -1.434 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
G/Y | 0.7158 | likely_pathogenic | 0.7482 | pathogenic | -1.099 | Destabilizing | 0.996 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.