Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27444 | 82555;82556;82557 | chr2:178563802;178563801;178563800 | chr2:179428529;179428528;179428527 |
N2AB | 25803 | 77632;77633;77634 | chr2:178563802;178563801;178563800 | chr2:179428529;179428528;179428527 |
N2A | 24876 | 74851;74852;74853 | chr2:178563802;178563801;178563800 | chr2:179428529;179428528;179428527 |
N2B | 18379 | 55360;55361;55362 | chr2:178563802;178563801;178563800 | chr2:179428529;179428528;179428527 |
Novex-1 | 18504 | 55735;55736;55737 | chr2:178563802;178563801;178563800 | chr2:179428529;179428528;179428527 |
Novex-2 | 18571 | 55936;55937;55938 | chr2:178563802;178563801;178563800 | chr2:179428529;179428528;179428527 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.939 | D | 0.598 | 0.737 | 0.847812062804 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.822 | likely_pathogenic | 0.8142 | pathogenic | -2.769 | Highly Destabilizing | 0.939 | D | 0.598 | neutral | D | 0.555441956 | None | None | N |
V/C | 0.9449 | likely_pathogenic | 0.9499 | pathogenic | -2.187 | Highly Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
V/D | 0.9967 | likely_pathogenic | 0.9966 | pathogenic | -3.523 | Highly Destabilizing | 0.997 | D | 0.877 | deleterious | D | 0.644574368 | None | None | N |
V/E | 0.9905 | likely_pathogenic | 0.9912 | pathogenic | -3.235 | Highly Destabilizing | 0.998 | D | 0.864 | deleterious | None | None | None | None | N |
V/F | 0.9039 | likely_pathogenic | 0.913 | pathogenic | -1.614 | Destabilizing | 0.982 | D | 0.789 | deleterious | D | 0.578319151 | None | None | N |
V/G | 0.883 | likely_pathogenic | 0.8891 | pathogenic | -3.283 | Highly Destabilizing | 0.997 | D | 0.877 | deleterious | D | 0.644574368 | None | None | N |
V/H | 0.9975 | likely_pathogenic | 0.9978 | pathogenic | -2.926 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
V/I | 0.0924 | likely_benign | 0.0952 | benign | -1.236 | Destabilizing | 0.046 | N | 0.272 | neutral | N | 0.515612721 | None | None | N |
V/K | 0.9924 | likely_pathogenic | 0.9934 | pathogenic | -2.367 | Highly Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | N |
V/L | 0.6008 | likely_pathogenic | 0.6256 | pathogenic | -1.236 | Destabilizing | 0.76 | D | 0.5 | neutral | N | 0.521925563 | None | None | N |
V/M | 0.7178 | likely_pathogenic | 0.7419 | pathogenic | -1.558 | Destabilizing | 0.986 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/N | 0.9879 | likely_pathogenic | 0.9872 | pathogenic | -3.03 | Highly Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9914 | likely_pathogenic | 0.9925 | pathogenic | -1.738 | Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | N |
V/Q | 0.9905 | likely_pathogenic | 0.9915 | pathogenic | -2.715 | Highly Destabilizing | 0.998 | D | 0.88 | deleterious | None | None | None | None | N |
V/R | 0.9869 | likely_pathogenic | 0.9883 | pathogenic | -2.33 | Highly Destabilizing | 0.998 | D | 0.887 | deleterious | None | None | None | None | N |
V/S | 0.9518 | likely_pathogenic | 0.952 | pathogenic | -3.454 | Highly Destabilizing | 0.993 | D | 0.864 | deleterious | None | None | None | None | N |
V/T | 0.8829 | likely_pathogenic | 0.8891 | pathogenic | -3.035 | Highly Destabilizing | 0.953 | D | 0.667 | neutral | None | None | None | None | N |
V/W | 0.9981 | likely_pathogenic | 0.9988 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
V/Y | 0.9898 | likely_pathogenic | 0.9912 | pathogenic | -1.883 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.