Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27447 | 82564;82565;82566 | chr2:178563793;178563792;178563791 | chr2:179428520;179428519;179428518 |
N2AB | 25806 | 77641;77642;77643 | chr2:178563793;178563792;178563791 | chr2:179428520;179428519;179428518 |
N2A | 24879 | 74860;74861;74862 | chr2:178563793;178563792;178563791 | chr2:179428520;179428519;179428518 |
N2B | 18382 | 55369;55370;55371 | chr2:178563793;178563792;178563791 | chr2:179428520;179428519;179428518 |
Novex-1 | 18507 | 55744;55745;55746 | chr2:178563793;178563792;178563791 | chr2:179428520;179428519;179428518 |
Novex-2 | 18574 | 55945;55946;55947 | chr2:178563793;178563792;178563791 | chr2:179428520;179428519;179428518 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs758840788 | -0.864 | 0.994 | N | 0.654 | 0.425 | 0.668599470789 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/M | rs758840788 | -0.864 | 0.994 | N | 0.654 | 0.425 | 0.668599470789 | gnomAD-4.0.0 | 4.77417E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.29849E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2594 | likely_benign | 0.3272 | benign | -1.992 | Destabilizing | 0.892 | D | 0.455 | neutral | N | 0.48615272 | None | None | N |
V/C | 0.7875 | likely_pathogenic | 0.8037 | pathogenic | -1.742 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
V/D | 0.9214 | likely_pathogenic | 0.918 | pathogenic | -2.88 | Highly Destabilizing | 0.95 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/E | 0.591 | likely_pathogenic | 0.5815 | pathogenic | -2.713 | Highly Destabilizing | 0.056 | N | 0.398 | neutral | N | 0.475371104 | None | None | N |
V/F | 0.4923 | ambiguous | 0.5087 | ambiguous | -1.271 | Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
V/G | 0.5529 | ambiguous | 0.5906 | pathogenic | -2.448 | Highly Destabilizing | 0.967 | D | 0.738 | prob.delet. | N | 0.516729371 | None | None | N |
V/H | 0.8889 | likely_pathogenic | 0.8971 | pathogenic | -2.191 | Highly Destabilizing | 0.997 | D | 0.81 | deleterious | None | None | None | None | N |
V/I | 0.1194 | likely_benign | 0.1155 | benign | -0.741 | Destabilizing | 0.901 | D | 0.481 | neutral | None | None | None | None | N |
V/K | 0.6368 | likely_pathogenic | 0.6468 | pathogenic | -1.586 | Destabilizing | 0.95 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/L | 0.5911 | likely_pathogenic | 0.5807 | pathogenic | -0.741 | Destabilizing | 0.773 | D | 0.469 | neutral | N | 0.490214417 | None | None | N |
V/M | 0.2749 | likely_benign | 0.2704 | benign | -0.916 | Destabilizing | 0.994 | D | 0.654 | neutral | N | 0.503144566 | None | None | N |
V/N | 0.7963 | likely_pathogenic | 0.7937 | pathogenic | -1.869 | Destabilizing | 0.975 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.9889 | likely_pathogenic | 0.9922 | pathogenic | -1.132 | Destabilizing | 0.987 | D | 0.779 | deleterious | None | None | None | None | N |
V/Q | 0.517 | ambiguous | 0.5272 | ambiguous | -1.807 | Destabilizing | 0.95 | D | 0.772 | deleterious | None | None | None | None | N |
V/R | 0.5666 | likely_pathogenic | 0.5913 | pathogenic | -1.341 | Destabilizing | 0.975 | D | 0.83 | deleterious | None | None | None | None | N |
V/S | 0.4573 | ambiguous | 0.5115 | ambiguous | -2.39 | Highly Destabilizing | 0.975 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/T | 0.4086 | ambiguous | 0.4174 | ambiguous | -2.102 | Highly Destabilizing | 0.916 | D | 0.522 | neutral | None | None | None | None | N |
V/W | 0.974 | likely_pathogenic | 0.9765 | pathogenic | -1.774 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
V/Y | 0.8685 | likely_pathogenic | 0.8781 | pathogenic | -1.413 | Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.