Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27454 | 82585;82586;82587 | chr2:178563772;178563771;178563770 | chr2:179428499;179428498;179428497 |
N2AB | 25813 | 77662;77663;77664 | chr2:178563772;178563771;178563770 | chr2:179428499;179428498;179428497 |
N2A | 24886 | 74881;74882;74883 | chr2:178563772;178563771;178563770 | chr2:179428499;179428498;179428497 |
N2B | 18389 | 55390;55391;55392 | chr2:178563772;178563771;178563770 | chr2:179428499;179428498;179428497 |
Novex-1 | 18514 | 55765;55766;55767 | chr2:178563772;178563771;178563770 | chr2:179428499;179428498;179428497 |
Novex-2 | 18581 | 55966;55967;55968 | chr2:178563772;178563771;178563770 | chr2:179428499;179428498;179428497 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1704595513 | None | 0.581 | N | 0.629 | 0.309 | 0.293502639404 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85851E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2897 | likely_benign | 0.2561 | benign | -0.706 | Destabilizing | 0.581 | D | 0.712 | prob.delet. | N | 0.477622982 | None | None | N |
E/C | 0.9142 | likely_pathogenic | 0.8822 | pathogenic | -0.35 | Destabilizing | 0.993 | D | 0.761 | deleterious | None | None | None | None | N |
E/D | 0.1561 | likely_benign | 0.1325 | benign | -0.764 | Destabilizing | 0.004 | N | 0.256 | neutral | N | 0.488409398 | None | None | N |
E/F | 0.8433 | likely_pathogenic | 0.8089 | pathogenic | -0.477 | Destabilizing | 0.993 | D | 0.776 | deleterious | None | None | None | None | N |
E/G | 0.3639 | ambiguous | 0.3215 | benign | -0.97 | Destabilizing | 0.83 | D | 0.753 | deleterious | N | 0.491763991 | None | None | N |
E/H | 0.7094 | likely_pathogenic | 0.6473 | pathogenic | -0.537 | Destabilizing | 0.98 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/I | 0.4549 | ambiguous | 0.402 | ambiguous | -0.016 | Destabilizing | 0.929 | D | 0.792 | deleterious | None | None | None | None | N |
E/K | 0.2978 | likely_benign | 0.2603 | benign | -0.413 | Destabilizing | 0.581 | D | 0.629 | neutral | N | 0.517249438 | None | None | N |
E/L | 0.5317 | ambiguous | 0.4703 | ambiguous | -0.016 | Destabilizing | 0.866 | D | 0.781 | deleterious | None | None | None | None | N |
E/M | 0.5743 | likely_pathogenic | 0.5293 | ambiguous | 0.231 | Stabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
E/N | 0.4078 | ambiguous | 0.3374 | benign | -0.637 | Destabilizing | 0.764 | D | 0.753 | deleterious | None | None | None | None | N |
E/P | 0.571 | likely_pathogenic | 0.5456 | ambiguous | -0.225 | Destabilizing | 0.929 | D | 0.805 | deleterious | None | None | None | None | N |
E/Q | 0.2487 | likely_benign | 0.2185 | benign | -0.587 | Destabilizing | 0.83 | D | 0.727 | prob.delet. | N | 0.473268115 | None | None | N |
E/R | 0.4902 | ambiguous | 0.4295 | ambiguous | -0.123 | Destabilizing | 0.866 | D | 0.756 | deleterious | None | None | None | None | N |
E/S | 0.3556 | ambiguous | 0.3003 | benign | -0.875 | Destabilizing | 0.48 | N | 0.666 | neutral | None | None | None | None | N |
E/T | 0.4383 | ambiguous | 0.3774 | ambiguous | -0.676 | Destabilizing | 0.866 | D | 0.776 | deleterious | None | None | None | None | N |
E/V | 0.293 | likely_benign | 0.2559 | benign | -0.225 | Destabilizing | 0.908 | D | 0.801 | deleterious | N | 0.517038794 | None | None | N |
E/W | 0.9611 | likely_pathogenic | 0.9509 | pathogenic | -0.305 | Destabilizing | 0.993 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.7561 | likely_pathogenic | 0.7017 | pathogenic | -0.262 | Destabilizing | 0.993 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.