Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27455 | 82588;82589;82590 | chr2:178563769;178563768;178563767 | chr2:179428496;179428495;179428494 |
N2AB | 25814 | 77665;77666;77667 | chr2:178563769;178563768;178563767 | chr2:179428496;179428495;179428494 |
N2A | 24887 | 74884;74885;74886 | chr2:178563769;178563768;178563767 | chr2:179428496;179428495;179428494 |
N2B | 18390 | 55393;55394;55395 | chr2:178563769;178563768;178563767 | chr2:179428496;179428495;179428494 |
Novex-1 | 18515 | 55768;55769;55770 | chr2:178563769;178563768;178563767 | chr2:179428496;179428495;179428494 |
Novex-2 | 18582 | 55969;55970;55971 | chr2:178563769;178563768;178563767 | chr2:179428496;179428495;179428494 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.709 | D | 0.637 | 0.251 | 0.292787519742 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85845E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0941 | likely_benign | 0.0878 | benign | -1.76 | Destabilizing | 0.004 | N | 0.347 | neutral | N | 0.465048454 | None | None | N |
P/C | 0.5312 | ambiguous | 0.5246 | ambiguous | -0.916 | Destabilizing | 0.98 | D | 0.803 | deleterious | None | None | None | None | N |
P/D | 0.8315 | likely_pathogenic | 0.8159 | pathogenic | -1.942 | Destabilizing | 0.866 | D | 0.689 | prob.neutral | None | None | None | None | N |
P/E | 0.6917 | likely_pathogenic | 0.6524 | pathogenic | -1.932 | Destabilizing | 0.866 | D | 0.623 | neutral | None | None | None | None | N |
P/F | 0.5511 | ambiguous | 0.5628 | ambiguous | -1.343 | Destabilizing | 0.98 | D | 0.807 | deleterious | None | None | None | None | N |
P/G | 0.4259 | ambiguous | 0.4248 | ambiguous | -2.08 | Highly Destabilizing | 0.48 | N | 0.583 | neutral | None | None | None | None | N |
P/H | 0.4064 | ambiguous | 0.4111 | ambiguous | -1.642 | Destabilizing | 0.991 | D | 0.772 | deleterious | D | 0.529289174 | None | None | N |
P/I | 0.5394 | ambiguous | 0.4973 | ambiguous | -0.956 | Destabilizing | 0.866 | D | 0.766 | deleterious | None | None | None | None | N |
P/K | 0.732 | likely_pathogenic | 0.7032 | pathogenic | -1.498 | Destabilizing | 0.866 | D | 0.629 | neutral | None | None | None | None | N |
P/L | 0.3367 | likely_benign | 0.3277 | benign | -0.956 | Destabilizing | 0.709 | D | 0.686 | prob.neutral | N | 0.515397973 | None | None | N |
P/M | 0.5045 | ambiguous | 0.4867 | ambiguous | -0.602 | Destabilizing | 0.98 | D | 0.777 | deleterious | None | None | None | None | N |
P/N | 0.6481 | likely_pathogenic | 0.6351 | pathogenic | -1.266 | Destabilizing | 0.929 | D | 0.763 | deleterious | None | None | None | None | N |
P/Q | 0.4766 | ambiguous | 0.448 | ambiguous | -1.46 | Destabilizing | 0.929 | D | 0.743 | deleterious | None | None | None | None | N |
P/R | 0.5943 | likely_pathogenic | 0.5781 | pathogenic | -0.889 | Destabilizing | 0.83 | D | 0.744 | deleterious | N | 0.513133475 | None | None | N |
P/S | 0.2082 | likely_benign | 0.1892 | benign | -1.713 | Destabilizing | 0.41 | N | 0.554 | neutral | N | 0.485634698 | None | None | N |
P/T | 0.2605 | likely_benign | 0.2359 | benign | -1.614 | Destabilizing | 0.709 | D | 0.637 | neutral | D | 0.528528705 | None | None | N |
P/V | 0.3751 | ambiguous | 0.3405 | ambiguous | -1.193 | Destabilizing | 0.764 | D | 0.648 | neutral | None | None | None | None | N |
P/W | 0.7378 | likely_pathogenic | 0.7387 | pathogenic | -1.592 | Destabilizing | 0.993 | D | 0.792 | deleterious | None | None | None | None | N |
P/Y | 0.5159 | ambiguous | 0.5192 | ambiguous | -1.333 | Destabilizing | 0.98 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.