Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27457 | 82594;82595;82596 | chr2:178563763;178563762;178563761 | chr2:179428490;179428489;179428488 |
N2AB | 25816 | 77671;77672;77673 | chr2:178563763;178563762;178563761 | chr2:179428490;179428489;179428488 |
N2A | 24889 | 74890;74891;74892 | chr2:178563763;178563762;178563761 | chr2:179428490;179428489;179428488 |
N2B | 18392 | 55399;55400;55401 | chr2:178563763;178563762;178563761 | chr2:179428490;179428489;179428488 |
Novex-1 | 18517 | 55774;55775;55776 | chr2:178563763;178563762;178563761 | chr2:179428490;179428489;179428488 |
Novex-2 | 18584 | 55975;55976;55977 | chr2:178563763;178563762;178563761 | chr2:179428490;179428489;179428488 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.813 | N | 0.515 | 0.111 | 0.382925413656 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79897E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2578 | likely_benign | 0.2872 | benign | -0.75 | Destabilizing | 0.007 | N | 0.439 | neutral | N | 0.47486105 | None | None | N |
E/C | 0.876 | likely_pathogenic | 0.8849 | pathogenic | -0.378 | Destabilizing | 0.996 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.2556 | likely_benign | 0.2367 | benign | -0.926 | Destabilizing | 0.813 | D | 0.515 | neutral | N | 0.462224071 | None | None | N |
E/F | 0.7883 | likely_pathogenic | 0.7951 | pathogenic | 0.17 | Stabilizing | 0.953 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.453 | ambiguous | 0.473 | ambiguous | -1.154 | Destabilizing | 0.518 | D | 0.576 | neutral | N | 0.494700052 | None | None | N |
E/H | 0.6717 | likely_pathogenic | 0.6639 | pathogenic | 0.089 | Stabilizing | 0.996 | D | 0.52 | neutral | None | None | None | None | N |
E/I | 0.3173 | likely_benign | 0.3557 | ambiguous | 0.368 | Stabilizing | 0.909 | D | 0.754 | deleterious | None | None | None | None | N |
E/K | 0.3937 | ambiguous | 0.4042 | ambiguous | -0.33 | Destabilizing | 0.682 | D | 0.439 | neutral | N | 0.47988748 | None | None | N |
E/L | 0.3846 | ambiguous | 0.4211 | ambiguous | 0.368 | Stabilizing | 0.909 | D | 0.647 | neutral | None | None | None | None | N |
E/M | 0.4902 | ambiguous | 0.5286 | ambiguous | 0.738 | Stabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/N | 0.4897 | ambiguous | 0.4935 | ambiguous | -1.042 | Destabilizing | 0.953 | D | 0.462 | neutral | None | None | None | None | N |
E/P | 0.7967 | likely_pathogenic | 0.8247 | pathogenic | 0.016 | Stabilizing | 0.009 | N | 0.475 | neutral | None | None | None | None | N |
E/Q | 0.2081 | likely_benign | 0.2121 | benign | -0.864 | Destabilizing | 0.938 | D | 0.497 | neutral | N | 0.489196045 | None | None | N |
E/R | 0.5511 | ambiguous | 0.5582 | ambiguous | 0.052 | Stabilizing | 0.953 | D | 0.464 | neutral | None | None | None | None | N |
E/S | 0.3607 | ambiguous | 0.3788 | ambiguous | -1.375 | Destabilizing | 0.587 | D | 0.417 | neutral | None | None | None | None | N |
E/T | 0.2989 | likely_benign | 0.3288 | benign | -1.019 | Destabilizing | 0.74 | D | 0.529 | neutral | None | None | None | None | N |
E/V | 0.1867 | likely_benign | 0.2061 | benign | 0.016 | Stabilizing | 0.518 | D | 0.591 | neutral | N | 0.477622982 | None | None | N |
E/W | 0.9484 | likely_pathogenic | 0.9456 | pathogenic | 0.541 | Stabilizing | 0.996 | D | 0.703 | prob.delet. | None | None | None | None | N |
E/Y | 0.7441 | likely_pathogenic | 0.7351 | pathogenic | 0.486 | Stabilizing | 0.984 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.