Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27464 | 82615;82616;82617 | chr2:178563742;178563741;178563740 | chr2:179428469;179428468;179428467 |
N2AB | 25823 | 77692;77693;77694 | chr2:178563742;178563741;178563740 | chr2:179428469;179428468;179428467 |
N2A | 24896 | 74911;74912;74913 | chr2:178563742;178563741;178563740 | chr2:179428469;179428468;179428467 |
N2B | 18399 | 55420;55421;55422 | chr2:178563742;178563741;178563740 | chr2:179428469;179428468;179428467 |
Novex-1 | 18524 | 55795;55796;55797 | chr2:178563742;178563741;178563740 | chr2:179428469;179428468;179428467 |
Novex-2 | 18591 | 55996;55997;55998 | chr2:178563742;178563741;178563740 | chr2:179428469;179428468;179428467 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1704578437 | None | None | N | 0.075 | 0.154 | 0.199424873507 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
C/R | rs1704578437 | None | None | N | 0.075 | 0.154 | 0.199424873507 | gnomAD-4.0.0 | 6.57497E-06 | None | None | None | None | N | None | 0 | 6.55996E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.1601 | likely_benign | 0.1466 | benign | -0.813 | Destabilizing | 0.003 | N | 0.135 | neutral | None | None | None | None | N |
C/D | 0.2998 | likely_benign | 0.2637 | benign | -0.139 | Destabilizing | 0.035 | N | 0.425 | neutral | None | None | None | None | N |
C/E | 0.2501 | likely_benign | 0.2256 | benign | -0.146 | Destabilizing | 0.007 | N | 0.257 | neutral | None | None | None | None | N |
C/F | 0.105 | likely_benign | 0.1012 | benign | -0.908 | Destabilizing | 0.162 | N | 0.593 | neutral | N | 0.512753269 | None | None | N |
C/G | 0.0999 | likely_benign | 0.0844 | benign | -0.982 | Destabilizing | 0.011 | N | 0.231 | neutral | N | 0.418016311 | None | None | N |
C/H | 0.1115 | likely_benign | 0.0985 | benign | -1.369 | Destabilizing | 0.204 | N | 0.534 | neutral | None | None | None | None | N |
C/I | 0.1625 | likely_benign | 0.1582 | benign | -0.444 | Destabilizing | 0.068 | N | 0.485 | neutral | None | None | None | None | N |
C/K | 0.1405 | likely_benign | 0.1179 | benign | -0.074 | Destabilizing | None | N | 0.078 | neutral | None | None | None | None | N |
C/L | 0.1637 | likely_benign | 0.1508 | benign | -0.444 | Destabilizing | 0.015 | N | 0.265 | neutral | None | None | None | None | N |
C/M | 0.2651 | likely_benign | 0.2599 | benign | -0.014 | Destabilizing | 0.439 | N | 0.288 | neutral | None | None | None | None | N |
C/N | 0.1855 | likely_benign | 0.1712 | benign | 0.145 | Stabilizing | 0.015 | N | 0.341 | neutral | None | None | None | None | N |
C/P | 0.8881 | likely_pathogenic | 0.8524 | pathogenic | -0.542 | Destabilizing | 0.068 | N | 0.548 | neutral | None | None | None | None | N |
C/Q | 0.1106 | likely_benign | 0.0981 | benign | -0.043 | Destabilizing | 0.018 | N | 0.401 | neutral | None | None | None | None | N |
C/R | 0.0587 | likely_benign | 0.0505 | benign | 0.074 | Stabilizing | None | N | 0.075 | neutral | N | 0.334186993 | None | None | N |
C/S | 0.1207 | likely_benign | 0.1112 | benign | -0.208 | Destabilizing | 0.011 | N | 0.292 | neutral | N | 0.432945691 | None | None | N |
C/T | 0.1559 | likely_benign | 0.1474 | benign | -0.087 | Destabilizing | 0.015 | N | 0.237 | neutral | None | None | None | None | N |
C/V | 0.1409 | likely_benign | 0.1376 | benign | -0.542 | Destabilizing | 0.015 | N | 0.255 | neutral | None | None | None | None | N |
C/W | 0.2566 | likely_benign | 0.2269 | benign | -0.925 | Destabilizing | 0.69 | D | 0.4 | neutral | N | 0.494938299 | None | None | N |
C/Y | 0.1264 | likely_benign | 0.1144 | benign | -0.739 | Destabilizing | 0.162 | N | 0.609 | neutral | N | 0.494591583 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.