Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27465 | 82618;82619;82620 | chr2:178563739;178563738;178563737 | chr2:179428466;179428465;179428464 |
N2AB | 25824 | 77695;77696;77697 | chr2:178563739;178563738;178563737 | chr2:179428466;179428465;179428464 |
N2A | 24897 | 74914;74915;74916 | chr2:178563739;178563738;178563737 | chr2:179428466;179428465;179428464 |
N2B | 18400 | 55423;55424;55425 | chr2:178563739;178563738;178563737 | chr2:179428466;179428465;179428464 |
Novex-1 | 18525 | 55798;55799;55800 | chr2:178563739;178563738;178563737 | chr2:179428466;179428465;179428464 |
Novex-2 | 18592 | 55999;56000;56001 | chr2:178563739;178563738;178563737 | chr2:179428466;179428465;179428464 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.938 | N | 0.605 | 0.323 | 0.318252033908 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.676 | likely_pathogenic | 0.6462 | pathogenic | -0.23 | Destabilizing | 0.587 | D | 0.587 | neutral | None | None | None | None | N |
N/C | 0.6624 | likely_pathogenic | 0.6312 | pathogenic | 0.406 | Stabilizing | 0.996 | D | 0.87 | deleterious | None | None | None | None | N |
N/D | 0.1952 | likely_benign | 0.1655 | benign | None | Stabilizing | 0.007 | N | 0.357 | neutral | N | 0.457921493 | None | None | N |
N/E | 0.8465 | likely_pathogenic | 0.807 | pathogenic | -0.051 | Destabilizing | 0.587 | D | 0.65 | prob.neutral | None | None | None | None | N |
N/F | 0.7819 | likely_pathogenic | 0.7624 | pathogenic | -0.702 | Destabilizing | 0.984 | D | 0.736 | deleterious | None | None | None | None | N |
N/G | 0.769 | likely_pathogenic | 0.7301 | pathogenic | -0.373 | Destabilizing | 0.74 | D | 0.653 | prob.neutral | None | None | None | None | N |
N/H | 0.2157 | likely_benign | 0.2085 | benign | -0.455 | Destabilizing | 0.938 | D | 0.605 | neutral | N | 0.491765488 | None | None | N |
N/I | 0.4706 | ambiguous | 0.44 | ambiguous | 0.053 | Stabilizing | 0.938 | D | 0.788 | deleterious | N | 0.490969021 | None | None | N |
N/K | 0.8471 | likely_pathogenic | 0.8091 | pathogenic | 0.112 | Stabilizing | 0.007 | N | 0.377 | neutral | N | 0.486952869 | None | None | N |
N/L | 0.4349 | ambiguous | 0.4211 | ambiguous | 0.053 | Stabilizing | 0.909 | D | 0.652 | prob.neutral | None | None | None | None | N |
N/M | 0.6647 | likely_pathogenic | 0.6332 | pathogenic | 0.394 | Stabilizing | 0.996 | D | 0.739 | deleterious | None | None | None | None | N |
N/P | 0.7647 | likely_pathogenic | 0.7544 | pathogenic | -0.016 | Destabilizing | 0.953 | D | 0.762 | deleterious | None | None | None | None | N |
N/Q | 0.7891 | likely_pathogenic | 0.75 | pathogenic | -0.29 | Destabilizing | 0.909 | D | 0.651 | prob.neutral | None | None | None | None | N |
N/R | 0.8554 | likely_pathogenic | 0.8227 | pathogenic | 0.182 | Stabilizing | 0.833 | D | 0.615 | neutral | None | None | None | None | N |
N/S | 0.1437 | likely_benign | 0.1373 | benign | -0.023 | Destabilizing | 0.682 | D | 0.689 | prob.delet. | D | 0.529821664 | None | None | N |
N/T | 0.4255 | ambiguous | 0.3725 | ambiguous | 0.052 | Stabilizing | 0.682 | D | 0.651 | prob.neutral | N | 0.473888236 | None | None | N |
N/V | 0.5547 | ambiguous | 0.5128 | ambiguous | -0.016 | Destabilizing | 0.909 | D | 0.78 | deleterious | None | None | None | None | N |
N/W | 0.9424 | likely_pathogenic | 0.9375 | pathogenic | -0.751 | Destabilizing | 0.996 | D | 0.876 | deleterious | None | None | None | None | N |
N/Y | 0.3707 | ambiguous | 0.342 | ambiguous | -0.464 | Destabilizing | 0.979 | D | 0.723 | deleterious | N | 0.488006507 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.