Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27469 | 82630;82631;82632 | chr2:178563727;178563726;178563725 | chr2:179428454;179428453;179428452 |
N2AB | 25828 | 77707;77708;77709 | chr2:178563727;178563726;178563725 | chr2:179428454;179428453;179428452 |
N2A | 24901 | 74926;74927;74928 | chr2:178563727;178563726;178563725 | chr2:179428454;179428453;179428452 |
N2B | 18404 | 55435;55436;55437 | chr2:178563727;178563726;178563725 | chr2:179428454;179428453;179428452 |
Novex-1 | 18529 | 55810;55811;55812 | chr2:178563727;178563726;178563725 | chr2:179428454;179428453;179428452 |
Novex-2 | 18596 | 56011;56012;56013 | chr2:178563727;178563726;178563725 | chr2:179428454;179428453;179428452 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs769678793 | 0.065 | 0.011 | N | 0.321 | 0.199 | 0.223146558224 | gnomAD-2.1.1 | 6.43E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 9.24499E-04 | None | 0 | None | 0 | 0 | 0 |
P/A | rs769678793 | 0.065 | 0.011 | N | 0.321 | 0.199 | 0.223146558224 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.86997E-04 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
P/A | rs769678793 | 0.065 | 0.011 | N | 0.321 | 0.199 | 0.223146558224 | gnomAD-4.0.0 | 9.91514E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.6775E-04 | None | 0 | 0 | 2.54292E-06 | 0 | 1.60056E-05 |
P/R | None | None | None | N | 0.219 | 0.091 | 0.149567049428 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85824E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0868 | likely_benign | 0.0824 | benign | -0.403 | Destabilizing | 0.011 | N | 0.321 | neutral | N | 0.469261509 | None | None | I |
P/C | 0.313 | likely_benign | 0.322 | benign | -0.55 | Destabilizing | 0.747 | D | 0.387 | neutral | None | None | None | None | I |
P/D | 0.7103 | likely_pathogenic | 0.6978 | pathogenic | -0.106 | Destabilizing | 0.035 | N | 0.56 | neutral | None | None | None | None | I |
P/E | 0.3681 | ambiguous | 0.3704 | ambiguous | -0.231 | Destabilizing | 0.018 | N | 0.402 | neutral | None | None | None | None | I |
P/F | 0.45 | ambiguous | 0.4585 | ambiguous | -0.806 | Destabilizing | 0.06 | N | 0.551 | neutral | None | None | None | None | I |
P/G | 0.4181 | ambiguous | 0.4104 | ambiguous | -0.506 | Destabilizing | 0.035 | N | 0.496 | neutral | None | None | None | None | I |
P/H | 0.2141 | likely_benign | 0.2104 | benign | -0.149 | Destabilizing | 0.204 | N | 0.427 | neutral | None | None | None | None | I |
P/I | 0.1389 | likely_benign | 0.1326 | benign | -0.291 | Destabilizing | None | N | 0.2 | neutral | None | None | None | None | I |
P/K | 0.1807 | likely_benign | 0.1866 | benign | -0.108 | Destabilizing | None | N | 0.221 | neutral | None | None | None | None | I |
P/L | 0.0701 | likely_benign | 0.0777 | benign | -0.291 | Destabilizing | None | N | 0.125 | neutral | N | 0.473493087 | None | None | I |
P/M | 0.195 | likely_benign | 0.1973 | benign | -0.191 | Destabilizing | 0.06 | N | 0.499 | neutral | None | None | None | None | I |
P/N | 0.4352 | ambiguous | 0.4225 | ambiguous | 0.112 | Stabilizing | 0.035 | N | 0.505 | neutral | None | None | None | None | I |
P/Q | 0.1523 | likely_benign | 0.1499 | benign | -0.18 | Destabilizing | 0.087 | N | 0.512 | neutral | N | 0.476569344 | None | None | I |
P/R | 0.1279 | likely_benign | 0.1351 | benign | 0.356 | Stabilizing | None | N | 0.219 | neutral | N | 0.509819246 | None | None | I |
P/S | 0.1949 | likely_benign | 0.1802 | benign | -0.268 | Destabilizing | 0.006 | N | 0.367 | neutral | N | 0.467922063 | None | None | I |
P/T | 0.1023 | likely_benign | 0.0983 | benign | -0.296 | Destabilizing | None | N | 0.177 | neutral | N | 0.458622422 | None | None | I |
P/V | 0.1003 | likely_benign | 0.098 | benign | -0.295 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | I |
P/W | 0.6033 | likely_pathogenic | 0.6294 | pathogenic | -0.851 | Destabilizing | 0.747 | D | 0.449 | neutral | None | None | None | None | I |
P/Y | 0.4105 | ambiguous | 0.4199 | ambiguous | -0.503 | Destabilizing | 0.204 | N | 0.499 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.