Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27471 | 82636;82637;82638 | chr2:178563721;178563720;178563719 | chr2:179428448;179428447;179428446 |
N2AB | 25830 | 77713;77714;77715 | chr2:178563721;178563720;178563719 | chr2:179428448;179428447;179428446 |
N2A | 24903 | 74932;74933;74934 | chr2:178563721;178563720;178563719 | chr2:179428448;179428447;179428446 |
N2B | 18406 | 55441;55442;55443 | chr2:178563721;178563720;178563719 | chr2:179428448;179428447;179428446 |
Novex-1 | 18531 | 55816;55817;55818 | chr2:178563721;178563720;178563719 | chr2:179428448;179428447;179428446 |
Novex-2 | 18598 | 56017;56018;56019 | chr2:178563721;178563720;178563719 | chr2:179428448;179428447;179428446 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | None | None | 0.999 | D | 0.81 | 0.408 | 0.730913411271 | gnomAD-4.0.0 | 1.36841E-06 | None | None | None | None | N | None | 0 | 2.23604E-05 | None | 0 | 2.52029E-05 | None | 0 | 0 | 0 | 0 | 0 |
G/S | rs757130634 | None | 0.114 | N | 0.303 | 0.113 | 0.253726318573 | gnomAD-4.0.0 | 8.21048E-06 | None | None | None | None | N | None | 2.98775E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.8942E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2432 | likely_benign | 0.2142 | benign | -0.822 | Destabilizing | 0.825 | D | 0.503 | neutral | N | 0.490434091 | None | None | N |
G/C | 0.3964 | ambiguous | 0.3316 | benign | -1.185 | Destabilizing | 0.999 | D | 0.81 | deleterious | D | 0.530227453 | None | None | N |
G/D | 0.4942 | ambiguous | 0.4665 | ambiguous | -2.211 | Highly Destabilizing | 0.988 | D | 0.706 | prob.neutral | N | 0.483326078 | None | None | N |
G/E | 0.6001 | likely_pathogenic | 0.5385 | ambiguous | -2.264 | Highly Destabilizing | 0.991 | D | 0.695 | prob.neutral | None | None | None | None | N |
G/F | 0.8422 | likely_pathogenic | 0.8006 | pathogenic | -1.238 | Destabilizing | 0.995 | D | 0.829 | deleterious | None | None | None | None | N |
G/H | 0.7559 | likely_pathogenic | 0.6933 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
G/I | 0.7258 | likely_pathogenic | 0.6561 | pathogenic | -0.475 | Destabilizing | 0.995 | D | 0.828 | deleterious | None | None | None | None | N |
G/K | 0.7577 | likely_pathogenic | 0.7004 | pathogenic | -1.342 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
G/L | 0.6508 | likely_pathogenic | 0.5799 | pathogenic | -0.475 | Destabilizing | 0.991 | D | 0.777 | deleterious | None | None | None | None | N |
G/M | 0.7734 | likely_pathogenic | 0.7175 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
G/N | 0.5967 | likely_pathogenic | 0.5745 | pathogenic | -1.182 | Destabilizing | 0.991 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/P | 0.9683 | likely_pathogenic | 0.9649 | pathogenic | -0.554 | Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
G/Q | 0.6935 | likely_pathogenic | 0.6273 | pathogenic | -1.439 | Destabilizing | 0.991 | D | 0.804 | deleterious | None | None | None | None | N |
G/R | 0.6897 | likely_pathogenic | 0.6074 | pathogenic | -0.973 | Destabilizing | 0.988 | D | 0.794 | deleterious | N | 0.510855751 | None | None | N |
G/S | 0.1583 | likely_benign | 0.1486 | benign | -1.308 | Destabilizing | 0.114 | N | 0.303 | neutral | N | 0.479821626 | None | None | N |
G/T | 0.3721 | ambiguous | 0.3279 | benign | -1.308 | Destabilizing | 0.938 | D | 0.644 | neutral | None | None | None | None | N |
G/V | 0.5902 | likely_pathogenic | 0.5143 | ambiguous | -0.554 | Destabilizing | 0.988 | D | 0.796 | deleterious | N | 0.511869709 | None | None | N |
G/W | 0.8058 | likely_pathogenic | 0.7377 | pathogenic | -1.595 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
G/Y | 0.7607 | likely_pathogenic | 0.6817 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.