Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2747482645;82646;82647 chr2:178563712;178563711;178563710chr2:179428439;179428438;179428437
N2AB2583377722;77723;77724 chr2:178563712;178563711;178563710chr2:179428439;179428438;179428437
N2A2490674941;74942;74943 chr2:178563712;178563711;178563710chr2:179428439;179428438;179428437
N2B1840955450;55451;55452 chr2:178563712;178563711;178563710chr2:179428439;179428438;179428437
Novex-11853455825;55826;55827 chr2:178563712;178563711;178563710chr2:179428439;179428438;179428437
Novex-21860156026;56027;56028 chr2:178563712;178563711;178563710chr2:179428439;179428438;179428437
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCA
  • RefSeq wild type template codon: AGT
  • Domain: Fn3-88
  • Domain position: 6
  • Structural Position: 6
  • Q(SASA): 0.4115
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/L rs781507920 None 0.97 N 0.739 0.291 0.470237251169 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.88E-06 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0739 likely_benign 0.0756 benign -0.705 Destabilizing 0.489 N 0.495 neutral N 0.515614642 None None N
S/C 0.1149 likely_benign 0.1124 benign -0.577 Destabilizing 0.998 D 0.715 prob.delet. None None None None N
S/D 0.3409 ambiguous 0.3575 ambiguous -0.753 Destabilizing 0.86 D 0.597 neutral None None None None N
S/E 0.4632 ambiguous 0.4772 ambiguous -0.716 Destabilizing 0.86 D 0.563 neutral None None None None N
S/F 0.2796 likely_benign 0.2605 benign -0.78 Destabilizing 0.993 D 0.793 deleterious None None None None N
S/G 0.0587 likely_benign 0.0592 benign -0.998 Destabilizing 0.019 N 0.211 neutral None None None None N
S/H 0.3995 ambiguous 0.4023 ambiguous -1.569 Destabilizing 0.998 D 0.718 prob.delet. None None None None N
S/I 0.2399 likely_benign 0.2504 benign -0.023 Destabilizing 0.993 D 0.79 deleterious None None None None N
S/K 0.6164 likely_pathogenic 0.6128 pathogenic -0.822 Destabilizing 0.076 N 0.302 neutral None None None None N
S/L 0.1162 likely_benign 0.1142 benign -0.023 Destabilizing 0.97 D 0.739 prob.delet. N 0.518385588 None None N
S/M 0.2203 likely_benign 0.2156 benign 0.183 Stabilizing 0.998 D 0.709 prob.delet. None None None None N
S/N 0.1537 likely_benign 0.1532 benign -0.933 Destabilizing 0.86 D 0.601 neutral None None None None N
S/P 0.3851 ambiguous 0.494 ambiguous -0.215 Destabilizing 0.99 D 0.756 deleterious N 0.514961281 None None N
S/Q 0.4607 ambiguous 0.4662 ambiguous -1.004 Destabilizing 0.956 D 0.613 neutral None None None None N
S/R 0.5819 likely_pathogenic 0.5744 pathogenic -0.825 Destabilizing 0.915 D 0.714 prob.delet. None None None None N
S/T 0.0896 likely_benign 0.0948 benign -0.811 Destabilizing 0.904 D 0.567 neutral N 0.480923278 None None N
S/V 0.1903 likely_benign 0.2035 benign -0.215 Destabilizing 0.978 D 0.736 prob.delet. None None None None N
S/W 0.5191 ambiguous 0.4984 ambiguous -0.838 Destabilizing 0.998 D 0.774 deleterious None None None None N
S/Y 0.2752 likely_benign 0.249 benign -0.536 Destabilizing 0.993 D 0.791 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.