Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27474 | 82645;82646;82647 | chr2:178563712;178563711;178563710 | chr2:179428439;179428438;179428437 |
N2AB | 25833 | 77722;77723;77724 | chr2:178563712;178563711;178563710 | chr2:179428439;179428438;179428437 |
N2A | 24906 | 74941;74942;74943 | chr2:178563712;178563711;178563710 | chr2:179428439;179428438;179428437 |
N2B | 18409 | 55450;55451;55452 | chr2:178563712;178563711;178563710 | chr2:179428439;179428438;179428437 |
Novex-1 | 18534 | 55825;55826;55827 | chr2:178563712;178563711;178563710 | chr2:179428439;179428438;179428437 |
Novex-2 | 18601 | 56026;56027;56028 | chr2:178563712;178563711;178563710 | chr2:179428439;179428438;179428437 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs781507920 | None | 0.97 | N | 0.739 | 0.291 | 0.470237251169 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0739 | likely_benign | 0.0756 | benign | -0.705 | Destabilizing | 0.489 | N | 0.495 | neutral | N | 0.515614642 | None | None | N |
S/C | 0.1149 | likely_benign | 0.1124 | benign | -0.577 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/D | 0.3409 | ambiguous | 0.3575 | ambiguous | -0.753 | Destabilizing | 0.86 | D | 0.597 | neutral | None | None | None | None | N |
S/E | 0.4632 | ambiguous | 0.4772 | ambiguous | -0.716 | Destabilizing | 0.86 | D | 0.563 | neutral | None | None | None | None | N |
S/F | 0.2796 | likely_benign | 0.2605 | benign | -0.78 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
S/G | 0.0587 | likely_benign | 0.0592 | benign | -0.998 | Destabilizing | 0.019 | N | 0.211 | neutral | None | None | None | None | N |
S/H | 0.3995 | ambiguous | 0.4023 | ambiguous | -1.569 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
S/I | 0.2399 | likely_benign | 0.2504 | benign | -0.023 | Destabilizing | 0.993 | D | 0.79 | deleterious | None | None | None | None | N |
S/K | 0.6164 | likely_pathogenic | 0.6128 | pathogenic | -0.822 | Destabilizing | 0.076 | N | 0.302 | neutral | None | None | None | None | N |
S/L | 0.1162 | likely_benign | 0.1142 | benign | -0.023 | Destabilizing | 0.97 | D | 0.739 | prob.delet. | N | 0.518385588 | None | None | N |
S/M | 0.2203 | likely_benign | 0.2156 | benign | 0.183 | Stabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
S/N | 0.1537 | likely_benign | 0.1532 | benign | -0.933 | Destabilizing | 0.86 | D | 0.601 | neutral | None | None | None | None | N |
S/P | 0.3851 | ambiguous | 0.494 | ambiguous | -0.215 | Destabilizing | 0.99 | D | 0.756 | deleterious | N | 0.514961281 | None | None | N |
S/Q | 0.4607 | ambiguous | 0.4662 | ambiguous | -1.004 | Destabilizing | 0.956 | D | 0.613 | neutral | None | None | None | None | N |
S/R | 0.5819 | likely_pathogenic | 0.5744 | pathogenic | -0.825 | Destabilizing | 0.915 | D | 0.714 | prob.delet. | None | None | None | None | N |
S/T | 0.0896 | likely_benign | 0.0948 | benign | -0.811 | Destabilizing | 0.904 | D | 0.567 | neutral | N | 0.480923278 | None | None | N |
S/V | 0.1903 | likely_benign | 0.2035 | benign | -0.215 | Destabilizing | 0.978 | D | 0.736 | prob.delet. | None | None | None | None | N |
S/W | 0.5191 | ambiguous | 0.4984 | ambiguous | -0.838 | Destabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
S/Y | 0.2752 | likely_benign | 0.249 | benign | -0.536 | Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.