Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27476 | 82651;82652;82653 | chr2:178563706;178563705;178563704 | chr2:179428433;179428432;179428431 |
N2AB | 25835 | 77728;77729;77730 | chr2:178563706;178563705;178563704 | chr2:179428433;179428432;179428431 |
N2A | 24908 | 74947;74948;74949 | chr2:178563706;178563705;178563704 | chr2:179428433;179428432;179428431 |
N2B | 18411 | 55456;55457;55458 | chr2:178563706;178563705;178563704 | chr2:179428433;179428432;179428431 |
Novex-1 | 18536 | 55831;55832;55833 | chr2:178563706;178563705;178563704 | chr2:179428433;179428432;179428431 |
Novex-2 | 18603 | 56032;56033;56034 | chr2:178563706;178563705;178563704 | chr2:179428433;179428432;179428431 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs2154161598 | None | 1.0 | D | 0.917 | 0.43 | 0.542764462858 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
P/S | None | None | 1.0 | D | 0.86 | 0.455 | 0.474406357249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5174 | ambiguous | 0.5886 | pathogenic | -2.217 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.501576587 | None | None | I |
P/C | 0.9313 | likely_pathogenic | 0.9496 | pathogenic | -2.33 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
P/D | 0.9984 | likely_pathogenic | 0.9984 | pathogenic | -2.977 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
P/E | 0.9912 | likely_pathogenic | 0.9914 | pathogenic | -2.762 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/F | 0.9912 | likely_pathogenic | 0.9934 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | I |
P/G | 0.9694 | likely_pathogenic | 0.9754 | pathogenic | -2.724 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | I |
P/H | 0.9923 | likely_pathogenic | 0.9933 | pathogenic | -2.35 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.543407411 | None | None | I |
P/I | 0.6327 | likely_pathogenic | 0.6942 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | I |
P/K | 0.9932 | likely_pathogenic | 0.9933 | pathogenic | -1.754 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/L | 0.3712 | ambiguous | 0.4269 | ambiguous | -0.797 | Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.475949028 | None | None | I |
P/M | 0.841 | likely_pathogenic | 0.8814 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
P/N | 0.9955 | likely_pathogenic | 0.996 | pathogenic | -2.163 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | I |
P/Q | 0.9812 | likely_pathogenic | 0.9839 | pathogenic | -2.036 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
P/R | 0.9854 | likely_pathogenic | 0.986 | pathogenic | -1.596 | Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.543407411 | None | None | I |
P/S | 0.9487 | likely_pathogenic | 0.96 | pathogenic | -2.775 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.525049666 | None | None | I |
P/T | 0.7742 | likely_pathogenic | 0.8198 | pathogenic | -2.414 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.542900432 | None | None | I |
P/V | 0.4212 | ambiguous | 0.4922 | ambiguous | -1.245 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | I |
P/W | 0.9981 | likely_pathogenic | 0.9987 | pathogenic | -1.777 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
P/Y | 0.9969 | likely_pathogenic | 0.9977 | pathogenic | -1.446 | Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.