Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27477 | 82654;82655;82656 | chr2:178563703;178563702;178563701 | chr2:179428430;179428429;179428428 |
N2AB | 25836 | 77731;77732;77733 | chr2:178563703;178563702;178563701 | chr2:179428430;179428429;179428428 |
N2A | 24909 | 74950;74951;74952 | chr2:178563703;178563702;178563701 | chr2:179428430;179428429;179428428 |
N2B | 18412 | 55459;55460;55461 | chr2:178563703;178563702;178563701 | chr2:179428430;179428429;179428428 |
Novex-1 | 18537 | 55834;55835;55836 | chr2:178563703;178563702;178563701 | chr2:179428430;179428429;179428428 |
Novex-2 | 18604 | 56035;56036;56037 | chr2:178563703;178563702;178563701 | chr2:179428430;179428429;179428428 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.822 | N | 0.51 | 0.165 | 0.32980341726 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
E/G | rs1184828155 | -1.173 | 0.014 | N | 0.4 | 0.281 | 0.27132560031 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1184828155 | -1.173 | 0.014 | N | 0.4 | 0.281 | 0.27132560031 | gnomAD-4.0.0 | 1.59122E-06 | None | None | None | None | I | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1858 | likely_benign | 0.2075 | benign | -0.738 | Destabilizing | 0.698 | D | 0.603 | neutral | N | 0.481154927 | None | None | I |
E/C | 0.8276 | likely_pathogenic | 0.8571 | pathogenic | -0.192 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | I |
E/D | 0.1604 | likely_benign | 0.194 | benign | -0.685 | Destabilizing | 0.822 | D | 0.51 | neutral | N | 0.484535515 | None | None | I |
E/F | 0.7514 | likely_pathogenic | 0.7996 | pathogenic | -0.437 | Destabilizing | 0.956 | D | 0.785 | deleterious | None | None | None | None | I |
E/G | 0.3034 | likely_benign | 0.3286 | benign | -1.007 | Destabilizing | 0.014 | N | 0.4 | neutral | N | 0.501994661 | None | None | I |
E/H | 0.4662 | ambiguous | 0.5194 | ambiguous | -0.463 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | I |
E/I | 0.3005 | likely_benign | 0.3476 | ambiguous | -0.034 | Destabilizing | 0.915 | D | 0.704 | prob.neutral | None | None | None | None | I |
E/K | 0.1773 | likely_benign | 0.1954 | benign | 0.005 | Stabilizing | 0.822 | D | 0.535 | neutral | N | 0.506298938 | None | None | I |
E/L | 0.3889 | ambiguous | 0.4458 | ambiguous | -0.034 | Destabilizing | 0.754 | D | 0.665 | neutral | None | None | None | None | I |
E/M | 0.4189 | ambiguous | 0.4757 | ambiguous | 0.266 | Stabilizing | 0.994 | D | 0.765 | deleterious | None | None | None | None | I |
E/N | 0.2967 | likely_benign | 0.3515 | ambiguous | -0.428 | Destabilizing | 0.956 | D | 0.564 | neutral | None | None | None | None | I |
E/P | 0.9424 | likely_pathogenic | 0.9463 | pathogenic | -0.248 | Destabilizing | 0.993 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/Q | 0.1443 | likely_benign | 0.1551 | benign | -0.368 | Destabilizing | 0.99 | D | 0.573 | neutral | N | 0.464897097 | None | None | I |
E/R | 0.2947 | likely_benign | 0.324 | benign | 0.218 | Stabilizing | 0.978 | D | 0.591 | neutral | None | None | None | None | I |
E/S | 0.2196 | likely_benign | 0.2565 | benign | -0.624 | Destabilizing | 0.86 | D | 0.525 | neutral | None | None | None | None | I |
E/T | 0.2072 | likely_benign | 0.237 | benign | -0.4 | Destabilizing | 0.86 | D | 0.649 | neutral | None | None | None | None | I |
E/V | 0.1707 | likely_benign | 0.1946 | benign | -0.248 | Destabilizing | 0.032 | N | 0.415 | neutral | N | 0.496796808 | None | None | I |
E/W | 0.914 | likely_pathogenic | 0.9319 | pathogenic | -0.19 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | I |
E/Y | 0.6637 | likely_pathogenic | 0.7056 | pathogenic | -0.171 | Destabilizing | 0.978 | D | 0.782 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.