Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27482 | 82669;82670;82671 | chr2:178563688;178563687;178563686 | chr2:179428415;179428414;179428413 |
N2AB | 25841 | 77746;77747;77748 | chr2:178563688;178563687;178563686 | chr2:179428415;179428414;179428413 |
N2A | 24914 | 74965;74966;74967 | chr2:178563688;178563687;178563686 | chr2:179428415;179428414;179428413 |
N2B | 18417 | 55474;55475;55476 | chr2:178563688;178563687;178563686 | chr2:179428415;179428414;179428413 |
Novex-1 | 18542 | 55849;55850;55851 | chr2:178563688;178563687;178563686 | chr2:179428415;179428414;179428413 |
Novex-2 | 18609 | 56050;56051;56052 | chr2:178563688;178563687;178563686 | chr2:179428415;179428414;179428413 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.638 | N | 0.489 | 0.519 | 0.407767136052 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1275 | likely_benign | 0.1225 | benign | -0.625 | Destabilizing | 0.002 | N | 0.185 | neutral | N | 0.520543246 | None | None | N |
T/C | 0.5271 | ambiguous | 0.5151 | ambiguous | -0.503 | Destabilizing | 0.947 | D | 0.489 | neutral | None | None | None | None | N |
T/D | 0.6925 | likely_pathogenic | 0.6803 | pathogenic | -1.255 | Destabilizing | 0.7 | D | 0.439 | neutral | None | None | None | None | N |
T/E | 0.6591 | likely_pathogenic | 0.6559 | pathogenic | -1.251 | Destabilizing | 0.539 | D | 0.43 | neutral | None | None | None | None | N |
T/F | 0.5541 | ambiguous | 0.5412 | ambiguous | -0.912 | Destabilizing | 0.826 | D | 0.602 | neutral | None | None | None | None | N |
T/G | 0.2269 | likely_benign | 0.2133 | benign | -0.868 | Destabilizing | 0.25 | N | 0.438 | neutral | None | None | None | None | N |
T/H | 0.4762 | ambiguous | 0.4562 | ambiguous | -1.326 | Destabilizing | 0.947 | D | 0.569 | neutral | None | None | None | None | N |
T/I | 0.6865 | likely_pathogenic | 0.6845 | pathogenic | -0.07 | Destabilizing | 0.638 | D | 0.489 | neutral | N | 0.508154088 | None | None | N |
T/K | 0.4522 | ambiguous | 0.4294 | ambiguous | -0.731 | Destabilizing | 0.539 | D | 0.441 | neutral | None | None | None | None | N |
T/L | 0.2197 | likely_benign | 0.2071 | benign | -0.07 | Destabilizing | 0.25 | N | 0.405 | neutral | None | None | None | None | N |
T/M | 0.1599 | likely_benign | 0.1578 | benign | 0.415 | Stabilizing | 0.947 | D | 0.485 | neutral | None | None | None | None | N |
T/N | 0.2121 | likely_benign | 0.2138 | benign | -0.904 | Destabilizing | 0.468 | N | 0.469 | neutral | N | 0.474891185 | None | None | N |
T/P | 0.7751 | likely_pathogenic | 0.7591 | pathogenic | -0.224 | Destabilizing | 0.638 | D | 0.493 | neutral | D | 0.526258343 | None | None | N |
T/Q | 0.3512 | ambiguous | 0.3405 | ambiguous | -1.163 | Destabilizing | 0.7 | D | 0.495 | neutral | None | None | None | None | N |
T/R | 0.3499 | ambiguous | 0.3208 | benign | -0.452 | Destabilizing | 0.7 | D | 0.497 | neutral | None | None | None | None | N |
T/S | 0.124 | likely_benign | 0.1254 | benign | -0.982 | Destabilizing | 0.002 | N | 0.275 | neutral | N | 0.509592747 | None | None | N |
T/V | 0.4448 | ambiguous | 0.4515 | ambiguous | -0.224 | Destabilizing | 0.25 | N | 0.402 | neutral | None | None | None | None | N |
T/W | 0.868 | likely_pathogenic | 0.8575 | pathogenic | -0.944 | Destabilizing | 0.982 | D | 0.607 | neutral | None | None | None | None | N |
T/Y | 0.6143 | likely_pathogenic | 0.6031 | pathogenic | -0.62 | Destabilizing | 0.826 | D | 0.602 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.