Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27484 | 82675;82676;82677 | chr2:178563682;178563681;178563680 | chr2:179428409;179428408;179428407 |
N2AB | 25843 | 77752;77753;77754 | chr2:178563682;178563681;178563680 | chr2:179428409;179428408;179428407 |
N2A | 24916 | 74971;74972;74973 | chr2:178563682;178563681;178563680 | chr2:179428409;179428408;179428407 |
N2B | 18419 | 55480;55481;55482 | chr2:178563682;178563681;178563680 | chr2:179428409;179428408;179428407 |
Novex-1 | 18544 | 55855;55856;55857 | chr2:178563682;178563681;178563680 | chr2:179428409;179428408;179428407 |
Novex-2 | 18611 | 56056;56057;56058 | chr2:178563682;178563681;178563680 | chr2:179428409;179428408;179428407 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1444267232 | 0.264 | 0.032 | N | 0.243 | 0.202 | 0.159798565429 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/N | rs1444267232 | 0.264 | 0.032 | N | 0.243 | 0.202 | 0.159798565429 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6069 | likely_pathogenic | 0.5285 | ambiguous | -0.427 | Destabilizing | 0.698 | D | 0.605 | neutral | N | 0.499312089 | None | None | N |
D/C | 0.9075 | likely_pathogenic | 0.8809 | pathogenic | 0.204 | Stabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
D/E | 0.3619 | ambiguous | 0.2931 | benign | -0.491 | Destabilizing | 0.014 | N | 0.226 | neutral | N | 0.473370247 | None | None | N |
D/F | 0.8606 | likely_pathogenic | 0.8361 | pathogenic | -0.726 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/G | 0.452 | ambiguous | 0.3861 | ambiguous | -0.62 | Destabilizing | 0.698 | D | 0.578 | neutral | N | 0.46736954 | None | None | N |
D/H | 0.7023 | likely_pathogenic | 0.6348 | pathogenic | -0.929 | Destabilizing | 0.992 | D | 0.647 | neutral | D | 0.523946124 | None | None | N |
D/I | 0.833 | likely_pathogenic | 0.7967 | pathogenic | 0.036 | Stabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
D/K | 0.8566 | likely_pathogenic | 0.8113 | pathogenic | 0.29 | Stabilizing | 0.754 | D | 0.615 | neutral | None | None | None | None | N |
D/L | 0.8319 | likely_pathogenic | 0.7926 | pathogenic | 0.036 | Stabilizing | 0.956 | D | 0.741 | deleterious | None | None | None | None | N |
D/M | 0.8977 | likely_pathogenic | 0.868 | pathogenic | 0.489 | Stabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
D/N | 0.1829 | likely_benign | 0.1622 | benign | 0.081 | Stabilizing | 0.032 | N | 0.243 | neutral | N | 0.477440256 | None | None | N |
D/P | 0.9917 | likely_pathogenic | 0.9891 | pathogenic | -0.097 | Destabilizing | 0.978 | D | 0.672 | neutral | None | None | None | None | N |
D/Q | 0.7693 | likely_pathogenic | 0.6977 | pathogenic | 0.068 | Stabilizing | 0.915 | D | 0.647 | neutral | None | None | None | None | N |
D/R | 0.875 | likely_pathogenic | 0.8422 | pathogenic | 0.174 | Stabilizing | 0.956 | D | 0.724 | prob.delet. | None | None | None | None | N |
D/S | 0.3822 | ambiguous | 0.328 | benign | -0.043 | Destabilizing | 0.754 | D | 0.519 | neutral | None | None | None | None | N |
D/T | 0.5267 | ambiguous | 0.4536 | ambiguous | 0.111 | Stabilizing | 0.956 | D | 0.624 | neutral | None | None | None | None | N |
D/V | 0.6689 | likely_pathogenic | 0.6121 | pathogenic | -0.097 | Destabilizing | 0.942 | D | 0.74 | deleterious | D | 0.522278189 | None | None | N |
D/W | 0.975 | likely_pathogenic | 0.969 | pathogenic | -0.679 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
D/Y | 0.4762 | ambiguous | 0.4289 | ambiguous | -0.5 | Destabilizing | 0.997 | D | 0.733 | prob.delet. | N | 0.510668394 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.