Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27485 | 82678;82679;82680 | chr2:178563679;178563678;178563677 | chr2:179428406;179428405;179428404 |
N2AB | 25844 | 77755;77756;77757 | chr2:178563679;178563678;178563677 | chr2:179428406;179428405;179428404 |
N2A | 24917 | 74974;74975;74976 | chr2:178563679;178563678;178563677 | chr2:179428406;179428405;179428404 |
N2B | 18420 | 55483;55484;55485 | chr2:178563679;178563678;178563677 | chr2:179428406;179428405;179428404 |
Novex-1 | 18545 | 55858;55859;55860 | chr2:178563679;178563678;178563677 | chr2:179428406;179428405;179428404 |
Novex-2 | 18612 | 56059;56060;56061 | chr2:178563679;178563678;178563677 | chr2:179428406;179428405;179428404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.99 | N | 0.759 | 0.463 | 0.738581242654 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1731 | likely_benign | 0.1296 | benign | -0.445 | Destabilizing | 0.014 | N | 0.223 | neutral | N | 0.498852152 | None | None | N |
S/C | 0.1687 | likely_benign | 0.1417 | benign | -0.756 | Destabilizing | 0.992 | D | 0.698 | prob.neutral | N | 0.506805097 | None | None | N |
S/D | 0.9285 | likely_pathogenic | 0.897 | pathogenic | -1.819 | Destabilizing | 0.86 | D | 0.543 | neutral | None | None | None | None | N |
S/E | 0.9381 | likely_pathogenic | 0.9099 | pathogenic | -1.757 | Destabilizing | 0.86 | D | 0.546 | neutral | None | None | None | None | N |
S/F | 0.4277 | ambiguous | 0.3684 | ambiguous | -0.684 | Destabilizing | 0.97 | D | 0.762 | deleterious | N | 0.506551607 | None | None | N |
S/G | 0.216 | likely_benign | 0.148 | benign | -0.712 | Destabilizing | 0.754 | D | 0.503 | neutral | None | None | None | None | N |
S/H | 0.6931 | likely_pathogenic | 0.6204 | pathogenic | -1.265 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/I | 0.7134 | likely_pathogenic | 0.6239 | pathogenic | 0.166 | Stabilizing | 0.956 | D | 0.768 | deleterious | None | None | None | None | N |
S/K | 0.9793 | likely_pathogenic | 0.9662 | pathogenic | -0.706 | Destabilizing | 0.86 | D | 0.553 | neutral | None | None | None | None | N |
S/L | 0.3609 | ambiguous | 0.2952 | benign | 0.166 | Stabilizing | 0.754 | D | 0.675 | neutral | None | None | None | None | N |
S/M | 0.4445 | ambiguous | 0.3874 | ambiguous | 0.356 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/N | 0.5363 | ambiguous | 0.4499 | ambiguous | -1.171 | Destabilizing | 0.978 | D | 0.567 | neutral | None | None | None | None | N |
S/P | 0.9957 | likely_pathogenic | 0.9945 | pathogenic | -0.004 | Destabilizing | 0.014 | N | 0.386 | neutral | D | 0.54522888 | None | None | N |
S/Q | 0.877 | likely_pathogenic | 0.8213 | pathogenic | -1.297 | Destabilizing | 0.978 | D | 0.621 | neutral | None | None | None | None | N |
S/R | 0.9581 | likely_pathogenic | 0.9288 | pathogenic | -0.638 | Destabilizing | 0.978 | D | 0.749 | deleterious | None | None | None | None | N |
S/T | 0.1685 | likely_benign | 0.1512 | benign | -0.859 | Destabilizing | 0.822 | D | 0.512 | neutral | D | 0.528221367 | None | None | N |
S/V | 0.6305 | likely_pathogenic | 0.5519 | ambiguous | -0.004 | Destabilizing | 0.754 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/W | 0.7277 | likely_pathogenic | 0.6749 | pathogenic | -0.877 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
S/Y | 0.456 | ambiguous | 0.3955 | ambiguous | -0.458 | Destabilizing | 0.99 | D | 0.759 | deleterious | N | 0.505537649 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.