Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27487 | 82684;82685;82686 | chr2:178563673;178563672;178563671 | chr2:179428400;179428399;179428398 |
N2AB | 25846 | 77761;77762;77763 | chr2:178563673;178563672;178563671 | chr2:179428400;179428399;179428398 |
N2A | 24919 | 74980;74981;74982 | chr2:178563673;178563672;178563671 | chr2:179428400;179428399;179428398 |
N2B | 18422 | 55489;55490;55491 | chr2:178563673;178563672;178563671 | chr2:179428400;179428399;179428398 |
Novex-1 | 18547 | 55864;55865;55866 | chr2:178563673;178563672;178563671 | chr2:179428400;179428399;179428398 |
Novex-2 | 18614 | 56065;56066;56067 | chr2:178563673;178563672;178563671 | chr2:179428400;179428399;179428398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs779268775 | -1.713 | 0.174 | N | 0.435 | 0.281 | 0.537262924806 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4109 | ambiguous | 0.4238 | ambiguous | -1.681 | Destabilizing | 0.174 | N | 0.435 | neutral | N | 0.506013724 | None | None | N |
V/C | 0.9178 | likely_pathogenic | 0.9185 | pathogenic | -1.285 | Destabilizing | 0.991 | D | 0.651 | neutral | None | None | None | None | N |
V/D | 0.8638 | likely_pathogenic | 0.8905 | pathogenic | -1.668 | Destabilizing | 0.826 | D | 0.773 | deleterious | None | None | None | None | N |
V/E | 0.7819 | likely_pathogenic | 0.8133 | pathogenic | -1.649 | Destabilizing | 0.782 | D | 0.693 | prob.neutral | N | 0.494007219 | None | None | N |
V/F | 0.4741 | ambiguous | 0.4673 | ambiguous | -1.295 | Destabilizing | 0.826 | D | 0.638 | neutral | None | None | None | None | N |
V/G | 0.6703 | likely_pathogenic | 0.6758 | pathogenic | -2.025 | Highly Destabilizing | 0.782 | D | 0.744 | deleterious | N | 0.490678035 | None | None | N |
V/H | 0.9142 | likely_pathogenic | 0.9173 | pathogenic | -1.562 | Destabilizing | 0.991 | D | 0.783 | deleterious | None | None | None | None | N |
V/I | 0.0873 | likely_benign | 0.0855 | benign | -0.819 | Destabilizing | 0.003 | N | 0.256 | neutral | N | 0.487601321 | None | None | N |
V/K | 0.8856 | likely_pathogenic | 0.8977 | pathogenic | -1.404 | Destabilizing | 0.826 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/L | 0.389 | ambiguous | 0.3663 | ambiguous | -0.819 | Destabilizing | 0.068 | N | 0.404 | neutral | N | 0.507917878 | None | None | N |
V/M | 0.2757 | likely_benign | 0.2696 | benign | -0.673 | Destabilizing | 0.826 | D | 0.526 | neutral | None | None | None | None | N |
V/N | 0.6839 | likely_pathogenic | 0.6955 | pathogenic | -1.254 | Destabilizing | 0.826 | D | 0.793 | deleterious | None | None | None | None | N |
V/P | 0.9738 | likely_pathogenic | 0.9695 | pathogenic | -1.073 | Destabilizing | 0.906 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/Q | 0.8013 | likely_pathogenic | 0.8088 | pathogenic | -1.417 | Destabilizing | 0.906 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/R | 0.8356 | likely_pathogenic | 0.8538 | pathogenic | -0.899 | Destabilizing | 0.826 | D | 0.797 | deleterious | None | None | None | None | N |
V/S | 0.529 | ambiguous | 0.5374 | ambiguous | -1.811 | Destabilizing | 0.704 | D | 0.644 | neutral | None | None | None | None | N |
V/T | 0.2223 | likely_benign | 0.2315 | benign | -1.679 | Destabilizing | 0.01 | N | 0.408 | neutral | None | None | None | None | N |
V/W | 0.9518 | likely_pathogenic | 0.9501 | pathogenic | -1.501 | Destabilizing | 0.991 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/Y | 0.851 | likely_pathogenic | 0.8491 | pathogenic | -1.211 | Destabilizing | 0.906 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.