Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27488 | 82687;82688;82689 | chr2:178563670;178563669;178563668 | chr2:179428397;179428396;179428395 |
N2AB | 25847 | 77764;77765;77766 | chr2:178563670;178563669;178563668 | chr2:179428397;179428396;179428395 |
N2A | 24920 | 74983;74984;74985 | chr2:178563670;178563669;178563668 | chr2:179428397;179428396;179428395 |
N2B | 18423 | 55492;55493;55494 | chr2:178563670;178563669;178563668 | chr2:179428397;179428396;179428395 |
Novex-1 | 18548 | 55867;55868;55869 | chr2:178563670;178563669;178563668 | chr2:179428397;179428396;179428395 |
Novex-2 | 18615 | 56068;56069;56070 | chr2:178563670;178563669;178563668 | chr2:179428397;179428396;179428395 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1704546804 | None | 0.055 | N | 0.512 | 0.065 | 0.434497104326 | gnomAD-4.0.0 | 2.18942E-05 | None | None | None | None | N | None | 2.98757E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.78836E-05 | 0 | 0 |
V/L | None | None | None | N | 0.331 | 0.073 | 0.344251166708 | gnomAD-4.0.0 | 6.84195E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5738 | likely_pathogenic | 0.6732 | pathogenic | -1.977 | Destabilizing | 0.104 | N | 0.697 | prob.neutral | N | 0.502416415 | None | None | N |
V/C | 0.9024 | likely_pathogenic | 0.9254 | pathogenic | -1.408 | Destabilizing | 0.968 | D | 0.766 | deleterious | None | None | None | None | N |
V/D | 0.9972 | likely_pathogenic | 0.9978 | pathogenic | -2.952 | Highly Destabilizing | 0.89 | D | 0.875 | deleterious | None | None | None | None | N |
V/E | 0.9908 | likely_pathogenic | 0.9927 | pathogenic | -2.624 | Highly Destabilizing | 0.667 | D | 0.821 | deleterious | D | 0.52967493 | None | None | N |
V/F | 0.7945 | likely_pathogenic | 0.85 | pathogenic | -1.109 | Destabilizing | 0.396 | N | 0.755 | deleterious | None | None | None | None | N |
V/G | 0.8315 | likely_pathogenic | 0.8736 | pathogenic | -2.609 | Highly Destabilizing | 0.667 | D | 0.836 | deleterious | N | 0.511735259 | None | None | N |
V/H | 0.9968 | likely_pathogenic | 0.9978 | pathogenic | -2.68 | Highly Destabilizing | 0.968 | D | 0.865 | deleterious | None | None | None | None | N |
V/I | 0.0969 | likely_benign | 0.0978 | benign | -0.151 | Destabilizing | 0.055 | N | 0.512 | neutral | N | 0.468994131 | None | None | N |
V/K | 0.9927 | likely_pathogenic | 0.9945 | pathogenic | -1.601 | Destabilizing | 0.726 | D | 0.799 | deleterious | None | None | None | None | N |
V/L | 0.2016 | likely_benign | 0.2212 | benign | -0.151 | Destabilizing | None | N | 0.331 | neutral | N | 0.390983559 | None | None | N |
V/M | 0.4584 | ambiguous | 0.5476 | ambiguous | -0.372 | Destabilizing | 0.396 | N | 0.696 | prob.neutral | None | None | None | None | N |
V/N | 0.9892 | likely_pathogenic | 0.9919 | pathogenic | -2.29 | Highly Destabilizing | 0.89 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9867 | likely_pathogenic | 0.987 | pathogenic | -0.738 | Destabilizing | 0.89 | D | 0.839 | deleterious | None | None | None | None | N |
V/Q | 0.9862 | likely_pathogenic | 0.9906 | pathogenic | -1.894 | Destabilizing | 0.89 | D | 0.842 | deleterious | None | None | None | None | N |
V/R | 0.9866 | likely_pathogenic | 0.9898 | pathogenic | -1.833 | Destabilizing | 0.726 | D | 0.876 | deleterious | None | None | None | None | N |
V/S | 0.9346 | likely_pathogenic | 0.9583 | pathogenic | -2.813 | Highly Destabilizing | 0.726 | D | 0.801 | deleterious | None | None | None | None | N |
V/T | 0.8242 | likely_pathogenic | 0.8739 | pathogenic | -2.312 | Highly Destabilizing | 0.272 | N | 0.681 | prob.neutral | None | None | None | None | N |
V/W | 0.9973 | likely_pathogenic | 0.9982 | pathogenic | -1.742 | Destabilizing | 0.968 | D | 0.85 | deleterious | None | None | None | None | N |
V/Y | 0.9876 | likely_pathogenic | 0.9914 | pathogenic | -1.319 | Destabilizing | 0.726 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.